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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02534
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  138/199 : Viruses  0/175   --->[See Alignment]
g.37.1
:579 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->69 1wjvA PDBj 2e-12 44.9 %
:RPS:PDB   4->98 1d4cB PDBj 7e-04 16.9 %
:RPS:PDB   212->496 3c3lB PDBj 6e-05 10.6 %
:HMM:SCOP  1->28 1wjvA1 g.37.1.2 * 5.2e-07 50.0 %
:HMM:SCOP  28->58 1wjvA2 g.37.1.2 * 1.9e-09 51.6 %
:RPS:PFM   30->57 PF08790 * zf-LYAR 6e-09 67.9 %
:HMM:PFM   30->57 PF08790 * zf-LYAR 1.4e-16 57.1 28/28  
:HMM:PFM   106->144 PF01213 * CAP_N 0.00061 36.8 38/312  
:BLT:SWISS 9->73 YH56_SCHPO 1e-16 54.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02537 GT:GENE CIRG_02534 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 579 SQ:AASEQ MVSFQCEACGDVFTKKKLDPHRGQCRGATFSCLDCMVHFKGTEYRSHTSCMSEAQKYQGALYKEKPAKGQKRKKTVTIADTVAAKGSRNPYVEDAPDVDDIRPPQNEAPPPPPAPSPPPATASLPPAASSKKEEKKDESLNVFEFLVPEDGRNASKVSLGGTKEQMKMVKDAPKLFDVPKELARLTDGREDDESVYDVAYEENGFSYGAGPIPPAPYNQPSNISMEFLTPVPGYKSKGRSKKDYPPSLELNRTNSDKKRKRTNPEHMVTPANQTKFEDDISMEDAPSSMVVNAPTPALNHSGLTGGLSRMTTRYSQSPDSPDYRSDREYLNGDRYPHPVSPIKRTRRATRDPNDENGLGISVKGRSAIVRTRRRSTPDGEKEQVIHVRKQKRHRVRQPETVKTSKSKHRTNDIPAANDEGEWDDFEDERPRRLKAIEYKRQTDSEDRSRSPRQGSTSKPKEDNQIVIYNHGKDESEDLDLLKREKANVFLSLVNKGPESERGCSIHKILKRFHRDKSASLGSEEQESKEGGERGRGRGRRRNRGLDKEKKDEEEQDLWRMLRLKKNDRGEVVVFLQPNT BL:SWS:NREP 1 BL:SWS:REP 9->73|YH56_SCHPO|1e-16|54.0|63/178| SEG 108->139|apppppapspppataslppaasskkeekkdes| SEG 521->544|gseeqeskeggergrgrgrrrnrg| SEG 546->556|dkekkdeeeqd| BL:PDB:NREP 1 BL:PDB:REP 1->69|1wjvA|2e-12|44.9|69/79| RP:PDB:NREP 2 RP:PDB:REP 4->98|1d4cB|7e-04|16.9|83/566| RP:PDB:REP 212->496|3c3lB|6e-05|10.6|255/1085| RP:PFM:NREP 1 RP:PFM:REP 30->57|PF08790|6e-09|67.9|28/28|zf-LYAR| HM:PFM:NREP 2 HM:PFM:REP 30->57|PF08790|1.4e-16|57.1|28/28|zf-LYAR| HM:PFM:REP 106->144|PF01213|0.00061|36.8|38/312|CAP_N| HM:SCP:REP 1->28|1wjvA1|5.2e-07|50.0|28/0|g.37.1.2|1/1|C2H2 and C2HC zinc fingers| HM:SCP:REP 28->58|1wjvA2|1.9e-09|51.6|31/0|g.37.1.2|1/1|C2H2 and C2HC zinc fingers| OP:NHOMO 166 OP:NHOMOORG 138 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --111-1-211-11-11111111111111111111111111111111-11-111---1111111111-11111111111111111111---111111111--111---2--1215-4--11-1-21121241-1-1---1--121-----21-1-1211371--11--1111111--11----------1---11111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 353 STR:RPRED 61.0 SQ:SECSTR ccEHHHHccHHHHHHTcccccTTccccccccGGGTcccccccccGTccccHccTTccccccccccTTccccccccccTccHHHHHHHHHccccEEccE#################################################################################################################ccccccEETTEEEEEccHHHHHHHHHHHHcccEEcH#############HHHHHHHHHcHHHH########HHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc##GGGccEEccEEEcTTccEEEcccccTTTcHHHHTTEEcccEEEccccTTcHHHHHHHHHHHHHTTccGGGccHHHHHHHHHHHHT#######TTTHHHHHHHHHHHHHccccTTHHHHHHHHHGGGccHHHHHHHHHHHHHHHcccGGGEEccEEEEEEccHH################################################################################### DISOP:02AL 579-580| PSIPRED cEEEEEccccccccccccccHHHcccccEEEEEEcccccccccccccHHccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEcccc //