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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02535
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  177/199 : Viruses  0/175   --->[See Alignment]
d.58.1d.68.7g.44.1
:1137 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   205->391 3cu7A PDBj 5e-04 5.9 %
:RPS:PDB   529->789 3cu7A PDBj 1e-10 7.1 %
:RPS:PDB   867->933 2cpmA PDBj 1e-08 14.9 %
:RPS:SCOP  188->220 1iymA  g.44.1.1 * 7e-04 33.3 %
:RPS:SCOP  419->809 1q16B  d.58.1.5 * 2e-06 6.0 %
:RPS:SCOP  868->926 1mszA  d.68.7.1 * 1e-09 18.6 %
:HMM:SCOP  184->268 1g25A_ g.44.1.1 * 7.1e-06 28.1 %
:HMM:SCOP  834->961 1whrA_ d.68.7.1 * 2.5e-11 22.6 %
:RPS:PFM   885->927 PF01424 * R3H 7e-06 48.8 %
:HMM:PFM   883->926 PF01424 * R3H 2.4e-11 40.9 44/55  
:HMM:PFM   295->312 PF01422 * zf-NF-X1 5e-05 50.0 18/20  
:HMM:PFM   346->369 PF01422 * zf-NF-X1 9.5e-06 72.2 18/20  
:HMM:PFM   488->510 PF01422 * zf-NF-X1 1.5e-05 77.8 18/20  
:HMM:PFM   605->624 PF01422 * zf-NF-X1 4.7e-05 55.0 20/20  
:HMM:PFM   717->733 PF01422 * zf-NF-X1 0.00021 56.2 16/20  
:BLT:SWISS 156->925 FAP1H_SCHPO e-166 40.3 %
:PROS 303->311|PS00197|2FE2S_FER_1
:PROS 361->369|PS00197|2FE2S_FER_1
:PROS 189->252|PS01359|ZF_PHD_1
:COIL
:REPEAT 8|284->337|342->394|419->479|484->536|595->651|652->706|707->738|739->795
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02538 GT:GENE CIRG_02535 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 1137 SQ:AASEQ MSTHISQIAESQDGNELRHNDSSRGGRGTRNRRNRNRDGHGGRGRSGVAHHTSGGDRGSRPSGRSRGRGGRRGDGEARRAQHISAARVDPGSGRIFAGRLTRPDELENANDRTPQGTNDSVENGPASLRADAPEFVPGAPSKASPSTALDSYLPTQRKPKQPRNPKTKSTADDIATRTHEDIQNGFYECPICTSELGRRSKVWSCKRCWTVFHLSCIKKWSNNEGSAMERPRGDDEENTEALRPRLWRCPGCNLPQDVMPSIYSCWCEKEIDPRPLPGLPPHSCGQSCSKSRNGCPHPCNLVCHAGPCASCQAMGPTQRCFCGRHESTKRCVDTDYENGWSCMKICGELLSCLRHKCQRPCHEGPCGACEESVHAKCYCGKVTKDMPCRETGEEKYSERGIEMEEISGEISTWTGSFDCTSICDRVYDCGLHRCQQSCHPQSRAVPHCPSSPDVVKHCQCGKSLLSDIPNAKARTSCEDPIPTCEKPCGKVLPCKHTCPKVCHSGPCPPCFLSVDIKCRCGRTSSKSLCHQGFGEPPQCMRVCKATMNCGRHTCGERCCPGQRQSIERQAAKRKLKPFSLRPQQMVEEIEAEHICTRVCDRTLKCSKHNCRELCHRGVCKTCPEAIFEEVSCHCGRTVLQPPLPCGTTAPACHYNCDRPKPCGHPQTPHTCHMDDENCPKCPYFVEKKCLCGRTSSKQPCSQPNGQCAFICSKPSKCGAHTCQRFCHRPGECSDSNSPCQKTCGKRLKTCGHPCQERCHAPYPCPESTPCRSRVSITCACGRLTEEKKCSSTREKPRTSDERLKCDDECARLKRNRDLASALNIDIDPVTTTAANPTVGPQDSDTLPYSDDTLDLYVQLSSSSTLATLQGYEASLHALATQDSQKSNRFPPCRSQLRAFIHSLAGDWGFQSESFDPEPVRHVFVYKAPGWISPGVAAAGQTRIGIRGLSVIECIKLRERERAREKEARRAAAEKARHEAEQLNDEWTVLEQKDEHGWSRVVSKKKPQWWNDSDIQKLAPNLAQTGPGEGSSMGLSSGRFGSLILKSGVGRGKEMDGSSSRPSSSGARKKLASDEEVVDDWEEEIEKEEKAEEKEKEEEKEKQEPSDVLPPDHQPWDWASEGEGESYIVETGFPIVGN BL:SWS:NREP 1 BL:SWS:REP 156->925|FAP1H_SCHPO|e-166|40.3|727/1077| PROS 303->311|PS00197|2FE2S_FER_1|PDOC00175| PROS 361->369|PS00197|2FE2S_FER_1|PDOC00175| PROS 189->252|PS01359|ZF_PHD_1|PDOC50016| COIL:NAA 31 COIL:NSEG 1 COIL:REGION 958->988| NREPEAT 1 REPEAT 8|284->337|342->394|419->479|484->536|595->651|652->706|707->738|739->795| SEG 22->47|ssrggrgtrnrrnrnrdghggrgrsg| SEG 53->79|sggdrgsrpsgrsrgrggrrgdgearr| SEG 397->411|sergiemeeisgeis| SEG 860->863|ssss| SEG 957->980|rererarekearraaaekarheae| SEG 1057->1064|sssrpsss| SEG 1081->1103|eeeiekeekaeekekeeekekqe| RP:PDB:NREP 3 RP:PDB:REP 205->391|3cu7A|5e-04|5.9|187/1625| RP:PDB:REP 529->789|3cu7A|1e-10|7.1|255/1625| RP:PDB:REP 867->933|2cpmA|1e-08|14.9|67/94| RP:PFM:NREP 1 RP:PFM:REP 885->927|PF01424|7e-06|48.8|43/56|R3H| HM:PFM:NREP 6 HM:PFM:REP 883->926|PF01424|2.4e-11|40.9|44/55|R3H| HM:PFM:REP 295->312|PF01422|5e-05|50.0|18/20|zf-NF-X1| HM:PFM:REP 346->369|PF01422|9.5e-06|72.2|18/20|zf-NF-X1| HM:PFM:REP 488->510|PF01422|1.5e-05|77.8|18/20|zf-NF-X1| HM:PFM:REP 605->624|PF01422|4.7e-05|55.0|20/20|zf-NF-X1| HM:PFM:REP 717->733|PF01422|0.00021|56.2|16/20|zf-NF-X1| GO:PFM:NREP 1 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF01424|IPR001374| RP:SCP:NREP 3 RP:SCP:REP 188->220|1iymA|7e-04|33.3|33/55|g.44.1.1| RP:SCP:REP 419->809|1q16B|2e-06|6.0|383/509|d.58.1.5| RP:SCP:REP 868->926|1mszA|1e-09|18.6|59/62|d.68.7.1| HM:SCP:REP 184->268|1g25A_|7.1e-06|28.1|64/65|g.44.1.1|1/1|RING/U-box| HM:SCP:REP 834->961|1whrA_|2.5e-11|22.6|124/0|d.68.7.1|1/1|R3H domain| OP:NHOMO 411 OP:NHOMOORG 177 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----112-422-11221211122131-111232221211111111112111-112222212212111111111111111111111111-12311121111111213-2-271433333332343763328I51667333332352233333335332446553964232312242111-----112254124---1--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 722 STR:RPRED 63.5 SQ:SECSTR ##########################################################################################################################################################################################################TTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccTTcccccTTccccEEEEEEcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHTTTcccEEccccccccccccccccHHHHHHHHHHHHHTTTTcHHHHHHHHHHHHHHHHHHcccEEcTHHHHHHHTTccccTTccccHHHHHHHHHcccHHHHHHHEETTEEEcHHcEEEEEEEcccEEEEEccTTccccEEEEEccTTccccccccccEEEHHHHHHHHHHHHHHGGGTTTTcccccccHHHHHHHHHHHHTTTcEEEEEEEcccccccTTcccccccccccccEEEEEEEEcccTTccccccccEEEEEEccTTcEEcHHHHHHHHccTTcccccccEETTEEEEEEccccccccEEEEEEEEccccccccccEEEEEEETTEEEEEEEEEEccccccccccccTTcHHHHccccccccccccccccccTTTHHHHcTTccEEEEEEEcEEEccccccccEEEEEEEEEEEccTTcccTHHHHTccEEEEccTTcTTcccccccccEEEEcccccccccccccccccccccccccccccccHHHHHHccHHHHHHHHccEEEEcTTccccccTTcTTccccccccccccTTTccTTcEEEEEcccEEEE#########HHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHTcEEEEEcccccccEEEEEccTTccc############################################################################################################################################################################################################ DISOP:02AL 13-34,1137-1138| PSIPRED cccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEcccccccEEEcccccccccHHHHHHHHccHHHHcccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccEEcccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHHccEEEEccccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccccccHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEccccccHHcccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEcccccccc //