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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02538
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  92/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:351 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   89->276 3ihoA PDBj 2e-19 44.7 %
:RPS:PDB   106->283 3cwsC PDBj 2e-12 15.1 %
:RPS:SCOP  101->337 1kg2A  a.96.1.2 * 2e-15 15.7 %
:HMM:SCOP  88->285 1ngnA_ a.96.1.2 * 1.8e-24 29.2 %
:RPS:PFM   112->172 PF00730 * HhH-GPD 5e-06 41.0 %
:HMM:PFM   112->175 PF00730 * HhH-GPD 3.5e-09 34.4 64/121  
:BLT:SWISS 32->276 MBD4_HUMAN 3e-19 40.1 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02541 GT:GENE CIRG_02538 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 351 SQ:AASEQ MLIANCASAEFSGSCKHRGGLSLESVEGNNTIFRSDTLPGNGWMRVDAATTDSSQPNRCCTEESMGKGQTKSRYFPQKRPDLASCLPFPPTSAPSFGLIQETLALDPFRLLIATIFLNRTRGEAAIPVLYDVFENYPTIGSLADADVDGLVAMIRKLGFQNARANKCISIAKLWMVSPPVKGKRFRKLHYPDKSDGLDIKPGESIDDEDTRIAWEIAHLPGIGAYAIDSWRIFCRDVLRGVATDWNGANAEEGFLPEWKSVRPKDKELRAFLTWMWLKEGWVWNPETGERTHATKRIRRAARRGGLVIEKNGNWILETPLVKKAKGYKKGNNTNLPIGISSEHRLRTEANI BL:SWS:NREP 1 BL:SWS:REP 32->276|MBD4_HUMAN|3e-19|40.1|172/580| BL:PDB:NREP 1 BL:PDB:REP 89->276|3ihoA|2e-19|44.7|132/138| RP:PDB:NREP 1 RP:PDB:REP 106->283|3cwsC|2e-12|15.1|152/281| RP:PFM:NREP 1 RP:PFM:REP 112->172|PF00730|5e-06|41.0|61/144|HhH-GPD| HM:PFM:NREP 1 HM:PFM:REP 112->175|PF00730|3.5e-09|34.4|64/121|HhH-GPD| GO:PFM:NREP 1 GO:PFM GO:0006284|"GO:base-excision repair"|PF00730|IPR003265| RP:SCP:NREP 1 RP:SCP:REP 101->337|1kg2A|2e-15|15.7|197/224|a.96.1.2| HM:SCP:REP 88->285|1ngnA_|1.8e-24|29.2|144/0|a.96.1.2|1/1|DNA-glycosylase| OP:NHOMO 110 OP:NHOMOORG 92 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------1111111111-1111111111-11111111111112122111111-1----------------------------211111--------------21111--11--1111-121351-21311--11111-11111-13-11111-1--1--------2------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 199 STR:RPRED 56.7 SQ:SECSTR ########################################################################################ccccT##TccccccccccHHHHHHHHHHTccccHHHHHHHHHHHHHHHcEEccccTTcEEccHHHHHHTTccHHHHHHHHHHHHHHHH#######HHcccccGHTHTccccccccTTcHHHHH##HHHTTcTTccHHHHHHHHHHHccccccccTTcHHHHHHHHcccTTccHHHHHHHHGGGTTcHHHHHHHHHTHHHH#HHHHHHHHHc#################################################### DISOP:02AL 17-18,20-20| PSIPRED cEEcccccccccccccccccccEEEEcccccEEEEccccccccEEEEccccccccccccccccccccHHHHHHHHcccccHHHHccccccccccccccccHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHcccccccccHHHHHHHHHHccccccccEEEEEEEEccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHccEEEEccccEEEEcccccccEEEEEccccEEEEccccccccHHcccc //