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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02546
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  746/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
c.117.1
:483 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   10->467 1m21A PDBj 7e-48 38.3 %
:RPS:PDB   2->464 2dqnA PDBj 7e-64 28.7 %
:RPS:SCOP  2->467 1m21A  c.117.1.1 * 7e-90 40.0 %
:HMM:SCOP  2->474 1m22A_ c.117.1.1 * 1.7e-85 31.6 %
:RPS:PFM   2->279 PF01425 * Amidase 1e-43 43.2 %
:HMM:PFM   2->291 PF01425 * Amidase 3.8e-67 38.0 276/435  
:HMM:PFM   402->453 PF01425 * Amidase 3.5e-05 40.0 35/435  
:BLT:SWISS 2->473 YI01_SCHPO 1e-61 38.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02549 GT:GENE CIRG_02546 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 483 SQ:AASEQ MRIKEVNDTLHVVSELNPDALETAKKLDRERHRENIRGPLHGLPILIKGNIGTRDKLQTTAGSYALLNTKLPEDSTVAKKLRDAGAIILGKVGLSEWANFRSTNSTNGWNAYGGQVTGAYYPNQDPSGSSSGSGVASDLGLAWATLGTETSGSIVSPGSSNNIVGLKPTVGLTSRYLVIPISAHQDTIGPMTRTVKDTAVLLQAIAGEDTNDNYTSAIPFSNLPDYVSACKLTALEGKRIGVPSNVLESFGKNPTNKPVLDAFRSALSIMESAGAIIVKDTNFTAYQEFVTSDIPGSVLNADFISDLARYFSQLEANPQNIHSLADARKFTQSSPFEQYPNRNTETWDLALEQGFNNTSPEFWPLYQKNLYFGGEGGLLGALERHNLDATVLPTDAAYPVPGVIGTPVISVPLGAYPEDQKVEHEPRRELVTVSPGFPFGIGFMGKHWSEQELIGMAYAFEQKTKARAELKRYIEPKFELNHN BL:SWS:NREP 1 BL:SWS:REP 2->473|YI01_SCHPO|1e-61|38.0|447/583| SEG 127->134|sgsssgsg| SEG 373->383|ggeggllgale| BL:PDB:NREP 1 BL:PDB:REP 10->467|1m21A|7e-48|38.3|405/487| RP:PDB:NREP 1 RP:PDB:REP 2->464|2dqnA|7e-64|28.7|421/485| RP:PFM:NREP 1 RP:PFM:REP 2->279|PF01425|1e-43|43.2|264/425|Amidase| HM:PFM:NREP 2 HM:PFM:REP 2->291|PF01425|3.8e-67|38.0|276/435|Amidase| HM:PFM:REP 402->453|PF01425|3.5e-05|40.0|35/435|Amidase| GO:PFM:NREP 1 GO:PFM GO:0016884|"GO:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"|PF01425|IPR000120| RP:SCP:NREP 1 RP:SCP:REP 2->467|1m21A|7e-90|40.0|432/487|c.117.1.1| HM:SCP:REP 2->474|1m22A_|1.7e-85|31.6|440/490|c.117.1.1|1/1|Amidase signature (AS) enzymes| OP:NHOMO 1960 OP:NHOMOORG 957 OP:PATTERN 11-1--1322222221-------2211111221111111111111111111111------------11 3592111311211142233-3211473333331444376411123121123131111111123113613111111111-121311111--------1------112112111111111-11111111111111111444331111323221122211111211111223431211111211113222211131133333333133333311111133322121122222113611111111111111111111211111111111111111111121111111111111111111111111111111111111111111111211-2111111111111-111---11211111112211111211111111151133321111111F971136366233333331223-554424284611733421425222C2122232111134221222222244111121111111111111111111111111111122251158A6843536523333339633331566646A3131113231152526542111111111111111121341221111111111111111111112222261111111-1-1111111111111111122---112-13-11-1-1-------------2--11122-------111--1------------------------------13111-------------------2----------11111111111----11111222212322---------------443441211112545313452133225661111111111--------------1121111-------1111111122-111-11111-----1-1-1-1-1111-11-1-1111112112111111 ----12--------266A6166647484545553336323233343536E9AED2454153532221332212143223322222122-3436121-114-11221-1-192211111---1-111-21251-1131--11111111-1-11-1-231122-161-12245113-1111A23124895D6371-1221- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 466 STR:RPRED 96.5 SQ:SECSTR #HHHHHHHHHccEEEEcHHHHHHHHHHHHHHHTTcccccccccEEEEETTcccTTcccccTTcGGGTTcccccccHHHHHHHHTTcEEEEEEcccGGGcccccTccccTTccccccccTTcTTcccccccHHHHHHHHTTcccEEEEEccccTTHHHHHHHTcEEEEccTTccccTTcccccTTTccEEEEEccHHHHHHHHHHHccccTTcTTcccccEEEcccccTTTTTcccTTcEEEEEccGGGGGGcTTccHHHHHHHHHHHHHHHHTTcEEEEccGGGGGHHHHHHHHHHHHHHHHHHHHTTTccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcTTTHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccHHHTccEEEEEEEEHHHHHHHHHHHTTcEEEEETTEEEEEEEEccTTcHHHHHHHHHHHHHHcccc################ PSIPRED ccHHHHcccccEEEEEcHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccHHHHHHHHcccccccHHHHHHHHHcccEEEEEEcHHHHHcccccccccccccccccccccccccccccccccHHHHHHHcccccEEEEccccccccccHHHcccEEEccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHcccccccccEEEEEHHHccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccEEEEccccccHHHHHccccEEEEEccccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccccccccccccccccc //