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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02549
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  94/199 : Viruses  0/175   --->[See Alignment]
b.1.2c.15.1
:438 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   168->239 2d8mA PDBj 2e-05 27.8 %
:RPS:PDB   99->255 3cojG PDBj 5e-20 13.6 %
:RPS:SCOP  76->162 2dn7A1  b.1.2.1 * 1e-06 20.7 %
:RPS:SCOP  146->255 1wf6A  c.15.1.5 * 3e-16 13.6 %
:HMM:SCOP  76->163 1tdqA2 b.1.2.1 * 3.3e-06 26.8 %
:HMM:SCOP  163->255 1cdzA_ c.15.1.1 * 1e-20 31.1 %
:RPS:PFM   169->237 PF00533 * BRCT 2e-10 42.0 %
:HMM:PFM   167->237 PF00533 * BRCT 7e-12 29.6 71/78  
:HMM:PFM   81->151 PF00041 * fn3 1.2e-05 28.2 71/85  
:HMM:PFM   10->50 PF11213 * DUF3006 2.6e-05 24.4 41/71  
:BLT:SWISS 5->297 CFR1_SCHPO 1e-68 46.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02552 GT:GENE CIRG_02549 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 438 SQ:AASEQ MLVSLTVGKVDAGVAVLLTQDNRLIEFPSVLLPSDITSGSIVDITVSRNLAAEASSVSAFQSLQKRILHTYGINTPSAPVLRLKNATQTSLVLEWDPINLATASLKSLSLYRNDSKAGSIPRPLEMRSTKISGLAIDTEYTFHLVLRTSAGTFSSQKLVCRTHKMTDLSGITVTPGIMPPEMRTSLENAVERIGAKIVDSIQIDTTHFVCTEGRGPSWEKAVEMNIPVVRPEWVDGCEREGTIVSVRGYYLNADPKLRQIGPGVGAHQNRQHAILNSSGAASVKSQNRGSISQSPPELKPEHREPPVTPFPGGPQNKMPHNGTDSDEDEPPPAPPKDNEDKMPTPSSDADKRTAEGNDDDDDDNDTEKVEENGISEVITNGNEAPKSPEPLSSEPQPEEDQGKPPEPSGNRPGSAKGKDSSAKRNGNGSEGEMDDVPL BL:SWS:NREP 1 BL:SWS:REP 5->297|CFR1_SCHPO|1e-68|46.6|290/620| SEG 324->340|dsdedepppappkdned| SEG 357->365|nddddddnd| SEG 383->399|eapkspeplssepqpee| BL:PDB:NREP 1 BL:PDB:REP 168->239|2d8mA|2e-05|27.8|72/129| RP:PDB:NREP 1 RP:PDB:REP 99->255|3cojG|5e-20|13.6|154/206| RP:PFM:NREP 1 RP:PFM:REP 169->237|PF00533|2e-10|42.0|69/76|BRCT| HM:PFM:NREP 3 HM:PFM:REP 167->237|PF00533|7e-12|29.6|71/78|BRCT| HM:PFM:REP 81->151|PF00041|1.2e-05|28.2|71/85|fn3| HM:PFM:REP 10->50|PF11213|2.6e-05|24.4|41/71|DUF3006| GO:PFM:NREP 1 GO:PFM GO:0005622|"GO:intracellular"|PF00533|IPR001357| RP:SCP:NREP 2 RP:SCP:REP 76->162|2dn7A1|1e-06|20.7|87/94|b.1.2.1| RP:SCP:REP 146->255|1wf6A|3e-16|13.6|110/132|c.15.1.5| HM:SCP:REP 76->163|1tdqA2|3.3e-06|26.8|82/0|b.1.2.1|1/1|Fibronectin type III| HM:SCP:REP 163->255|1cdzA_|1e-20|31.1|90/96|c.15.1.1|1/1|BRCT domain| OP:NHOMO 96 OP:NHOMOORG 94 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------1111111111111111111111111111111111111111111111111111111111111111111111111111-12111111111111111-----------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 216 STR:RPRED 49.3 SQ:SECSTR #############################################TTcHHHHTTGGGcccHHHHTcTTcEEEEccEEEEEEEEEETTEEEEEEEEcccccccccHHHHHHHHTTccEcEEEETHHHHHHHHHTccccGGGGccccccccccccccHHHHHHGGGccTTTTEEEEccccccccHHHHHHHHHHTTccEEccTTcccEEEEEEcccccccccTTTccccEEETHHHHHHHHHTcccccccccccccccccccc################################################################################################################################################################################# DISOP:02AL 438-439| PSIPRED cEEEEEEEEEcccEEEEEcccccEEEccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEcccEEEcccccccEEEEEEEcccccccEEEEEEEEcccccccccEEEEEEEcccccccEEEEEccccHHHHHHHHHHHHHHccEEEEcccccccEEEEEcccccHHHHHHHcccEEEcHHHHHHHHHccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //