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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02551
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  0/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
b.40.4
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->122 1d7qA PDBj 1e-45 84.5 %
:RPS:PDB   26->145 1d7qA PDBj 2e-14 77.8 %
:RPS:SCOP  26->111 1jt8A  b.40.4.5 * 1e-26 33.7 %
:HMM:SCOP  2->144 1d7qA_ b.40.4.5 * 6.8e-51 49.7 %
:RPS:PFM   37->94 PF01176 * eIF-1a 4e-06 37.9 %
:HMM:PFM   30->94 PF01176 * eIF-1a 2.1e-31 52.3 65/65  
:HMM:PFM   114->141 PF12619 * MCM2_N 0.001 35.7 28/156  
:BLT:SWISS 26->135 IF1A_SCHPO 2e-47 80.9 %
:PROS 41->63|PS01262|IF1A
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02554 GT:GENE CIRG_02551 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 149 SQ:AASEQ MPKNKGKGGKNRRRGKNENDNEKRELTFKEEGQEYAQVVKMLGNGRLEALCFDGEKRLAHIRGKLRKKVWINQGDIILLSLRDYQDEKGDVILKYSADEARSLKAYGELPESAKINETDTYGHEGLDDNVEFDEDRESADEKDIDIDEI BL:SWS:NREP 1 BL:SWS:REP 26->135|IF1A_SCHPO|2e-47|80.9|110/138| PROS 41->63|PS01262|IF1A|PDOC00970| SEG 3->25|knkgkggknrrrgknendnekre| BL:PDB:NREP 1 BL:PDB:REP 26->122|1d7qA|1e-45|84.5|97/143| RP:PDB:NREP 1 RP:PDB:REP 26->145|1d7qA|2e-14|77.8|117/143| RP:PFM:NREP 1 RP:PFM:REP 37->94|PF01176|4e-06|37.9|58/66|eIF-1a| HM:PFM:NREP 2 HM:PFM:REP 30->94|PF01176|2.1e-31|52.3|65/65|eIF-1a| HM:PFM:REP 114->141|PF12619|0.001|35.7|28/156|MCM2_N| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF01176|IPR006196| GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF01176|IPR006196| GO:PFM GO:0006413|"GO:translational initiation"|PF01176|IPR006196| RP:SCP:NREP 1 RP:SCP:REP 26->111|1jt8A|1e-26|33.7|86/102|b.40.4.5| HM:SCP:REP 2->144|1d7qA_|6.8e-51|49.7|143/143|b.40.4.5|1/1|Nucleic acid-binding proteins| OP:NHOMO 341 OP:NHOMOORG 239 OP:PATTERN 111111111111111111--11-122212222111111---------1113221-------1-11--- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1211111131111111111111111111111111111111111111211111111111111111111111111111111111111111-12111111111121111111111212221133-41A2-11482-425112111111111111-121211113112111211121311111I2111142441311112111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 118 STR:RPRED 79.2 SQ:SECSTR #########################ccccccccEEEEEEEcccccEEEEEcTTccEEEEEccTTcccccccccccEEEEEccccccccEEEEEEccHHHHHHHHHHTcccHHHHHHTTccccccccccccccccccc##cccccc#### DISOP:02AL 148-150| PSIPRED ccccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEccccEEEEEcccccccEEEEEEEEcHHHHHHHHHcccccccEEEcccccccccccccccccccccccccccccccccc //