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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02561
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  80/199 : Viruses  0/175   --->[See Alignment]
f.39.1
:592 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  50->135 1s7bA  f.39.1.1 * 2e-09 10.5 %
:HMM:SCOP  18->136 1s7bA_ f.39.1.1 * 1.4e-06 21.0 %
:RPS:PFM   55->332 PF05653 * DUF803 4e-17 28.0 %
:HMM:PFM   221->333 PF05653 * DUF803 1.8e-12 22.3 112/300  
:HMM:PFM   64->128 PF00892 * EamA 2.1e-08 23.4 64/126  
:BLT:SWISS 59->156 NIPA1_MOUSE 5e-06 27.8 %
:PROS 2->9|PS00687|ALDEHYDE_DEHYDR_GLU
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02564 GT:GENE CIRG_02561 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 592 SQ:AASEQ MGELGGLSPQGGIAIGVLVGLISTSLQAIGLTLQRKSHILEDEKYPYDNRRPPYKRARWQLGMFMFVLSNIVGSTIQITTLPLPVLSTLQAAGLVFNTIFATLILGEPFTRYSFGGTVLVCVGAVLIAIFGAIGEPAHTLDQLLELLSRPPFLRWIAGTAVIVVVTLLGARLLKNLSTPGRTSGWTLLKLSRSHSPYHHHHHHSPRLKTLRGVLFGAVSGILSAHSLLVAKTAVELLVRTILDRVNQFNRWQSWIILLGLVVLSLTQLYYMHRGLKLCSTSILYPFVFCVYNIIAILDGLIYFHQASRLSGLHAGLIALGTVILLSGVLCLSWRLEEVTTQPEASPAAAALVPGLGILEEQATSPTYTDFIYPSDEESYPAERQPLLLHSPTQQTTPSRRYTPTFSRISPQQRHSINITNEAAQIWAELHDESNNITTQEQDRVPTSPTPFHRHRHSHHKSQRSKSSAAPFPPNDISTPQPSSPVTGRERSIKWKSIFKASPSSRSRQHRNGNMWRRASTPVVAEENHEGRRTIIQRDVSANARTTARTDIPNGSPEAIRASLDETQQTEHDNGEEVMSKETWFGRLFRRRR BL:SWS:NREP 1 BL:SWS:REP 59->156|NIPA1_MOUSE|5e-06|27.8|97/323| PROS 2->9|PS00687|ALDEHYDE_DEHYDR_GLU|PDOC00068| TM:NTM 9 TM:REGION 11->33| TM:REGION 61->83| TM:REGION 89->111| TM:REGION 117->139| TM:REGION 155->177| TM:REGION 215->237| TM:REGION 250->272| TM:REGION 278->300| TM:REGION 313->335| SEG 11->22|ggiaigvlvgli| SEG 191->206|srshspyhhhhhhspr| SEG 257->268|llglvvlsltql| SEG 452->467|hrhrhshhksqrskss| RP:PFM:NREP 1 RP:PFM:REP 55->332|PF05653|4e-17|28.0|243/295|DUF803| HM:PFM:NREP 2 HM:PFM:REP 221->333|PF05653|1.8e-12|22.3|112/300|DUF803| HM:PFM:REP 64->128|PF00892|2.1e-08|23.4|64/126|EamA| RP:SCP:NREP 1 RP:SCP:REP 50->135|1s7bA|2e-09|10.5|86/106|f.39.1.1| HM:SCP:REP 18->136|1s7bA_|1.4e-06|21.0|105/106|f.39.1.1|1/2|Multidrug resistance efflux transporter EmrE| OP:NHOMO 95 OP:NHOMOORG 80 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------111111111111111111111111121111111--11111111111111111111----111---------111---2111112221-11334----------------------------------------------------------------------1------------1----2212- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 592-593| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHEEEcccccccccHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccEEEccHHHHHcccccccccHHHHHHHHHHccccccccccHHcccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHcc //