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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02583
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  57/199 : Viruses  0/175   --->[See Alignment]
d.101.1d.14.1
:410 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   46->409 2nn6C PDBj 1e-16 32.7 %
:RPS:PDB   49->93,225->409 3dd6A PDBj 2e-14 13.6 %
:RPS:SCOP  43->93,204->263 2nn6E1  d.14.1.4 * 3e-11 33.3 %
:RPS:SCOP  340->406 2ba0G2  d.101.1.1 * 6e-06 24.6 %
:HMM:SCOP  49->265 1oysA1 d.14.1.4 * 4.4e-19 30.7 %
:RPS:PFM   58->93,225->263 PF01138 * RNase_PH 1e-08 61.1 %
:HMM:PFM   58->263 PF01138 * RNase_PH 1.3e-22 35.2 125/132  
:BLT:SWISS 46->409 EXOS8_HUMAN 3e-16 32.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02586 GT:GENE CIRG_02583 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 410 SQ:AASEQ MTSTAPNTKAPATPSPFLSLSPAHLARLQPHTYVYAHLNPSPDISRPSIRINGRTESQFRPASVNTGSLSHTNGSAVVRIGDTTAVCGVRGEILSTHDIPAWKVSNNGAGSSWGSPQKRNQDHDAEDEDYDEDDSEIHAFNLLVPNLSLSTGCSPSILPGSAPSSLAQSLSHQLLSLLHSSRLIRASDLRIWSNPNPTQAPSQEQSEDIDMEDTPAFTDSVGAPELKAFWTLYIDVLIISHAGSPFDAAWAAIVAALQDVRLPKAWWDIDNDMVLCSDRVSESKKLRLRGMPISSSFAVFEADPVGDWRKVIIPLQDGEPKEKDQTSADDGDAARRKRWILADPDAFEESLCQERVCIVVDKDGKKPGCMKILMMEKGGGFYVGKSEIKGLVELASVRWEEWRALLEGVR BL:SWS:NREP 1 BL:SWS:REP 46->409|EXOS8_HUMAN|3e-16|32.7|251/276| SEG 122->136|dhdaededydeddse| SEG 158->183|lpgsapsslaqslshqllsllhssrl| BL:PDB:NREP 1 BL:PDB:REP 46->409|2nn6C|1e-16|32.7|251/270| RP:PDB:NREP 1 RP:PDB:REP 49->93,225->409|3dd6A|2e-14|13.6|177/244| RP:PFM:NREP 1 RP:PFM:REP 58->93,225->263|PF01138|1e-08|61.1|75/130|RNase_PH| HM:PFM:NREP 1 HM:PFM:REP 58->263|PF01138|1.3e-22|35.2|125/132|RNase_PH| GO:PFM:NREP 3 GO:PFM GO:0000175|"GO:3'-5'-exoribonuclease activity"|PF01138|IPR001247| GO:PFM GO:0003723|"GO:RNA binding"|PF01138|IPR001247| GO:PFM GO:0006396|"GO:RNA processing"|PF01138|IPR001247| RP:SCP:NREP 2 RP:SCP:REP 43->93,204->263|2nn6E1|3e-11|33.3|104/181|d.14.1.4| RP:SCP:REP 340->406|2ba0G2|6e-06|24.6|61/79|d.101.1.1| HM:SCP:REP 49->265|1oysA1|4.4e-19|30.7|140/151|d.14.1.4|1/1|Ribosomal protein S5 domain 2-like| OP:NHOMO 57 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------11111111111111111111111111111111111111111111111------------------1-----11-1-11-11---1-----------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 322 STR:RPRED 78.5 SQ:SECSTR #################ccccccccccHHHHHHHHHHHTTT##ccTTccccccccTTccccEEEEEcccccccEEEEEEETTEEEEEEEEEEcEcccccccTTcTTcccccccccTTcc#####################cccEEEEEcccccc################################TTcccccccHGGGGTHHHHTTcccGGTcccGGGGGcccHHHcccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHTTEEEEEccEEEEEEccccccccccEEEEEEEEETTTEEEcEEEEEEEEETTEE################TTEEEEcccHHHHHTEEEEEEEEEETTcccEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH DISOP:02AL 410-411| PSIPRED cccccccccccccccccccccHHHHHHcccHHHHHHHHccHHHHHccccccccccHHHEEEEEEEEccEEccccEEEEEEcccEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccHHHcccccccHHHHHHHHHHHHHHHHccccccHHcEEEEccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEccccHHHHHHHHHHHHHHcccccEEEEEccccEEEEEccccccEEEccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEccHHHHHHHcccEEEEEccccccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcc //