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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02601
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  62/199 : Viruses  0/175   --->[See Alignment]
b.118.1
:443 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   123->405 1o70A PDBj 7e-09 25.3 %
:RPS:SCOP  111->248 1o70A2  b.118.1.1 * 9e-14 20.4 %
:RPS:SCOP  262->404 1o70A2  b.118.1.1 * 3e-17 18.2 %
:HMM:SCOP  115->248 1o70A1 b.118.1.1 * 2.7e-18 26.7 %
:HMM:SCOP  272->409 1o70A2 b.118.1.1 * 3.8e-21 32.6 %
:RPS:PFM   125->247 PF02469 * Fasciclin 2e-08 26.5 %
:RPS:PFM   262->403 PF02469 * Fasciclin 3e-12 39.4 %
:HMM:PFM   122->247 PF02469 * Fasciclin 1.3e-15 25.0 120/131  
:HMM:PFM   270->403 PF02469 * Fasciclin 3.7e-26 38.0 121/131  
:BLT:SWISS 109->158 YFAS1_SCHPO 7e-05 36.0 %
:BLT:SWISS 141->411 BGH3_HUMAN 9e-13 29.0 %
:TM
:REPEAT 2|166->259|314->416

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02604 GT:GENE CIRG_02601 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 443 SQ:AASEQ MKLVLLLSAAYIAAGFVIPGQSSLDPFIGYSASIPSPVSDDSRAEGGIAFSTSYTEEIFNNIEIASTLALYQPQSGRLSKPEKNAVDEFSHDYLDANSPNFCGHHGDPEKTTYQLINSTKRTKLFAKLVSQFDDIVDLLNSTKENHTVLVPRDKALQKAMNHHPPKEYVKKFVQYHILKEPKTAREIFHSRTIRTLLEQSELGDHDQRISTQFGVGGLTLNYISHIVKPDLCAKNGLVQILDHILLPPFQSSDTLSLVPSVFSALDFGLWKTGLYEKLNDTSSHTGGTFFAPTNIAFRKLGPRVNAFLFSRWGEKHLKALLEYHIVFGHTLYSDAYHQPKKDEDSKTIHVDLPTLLENHRLSIDIARFYRFATMKINGFISVASSDIIARDGVIHVLNDVLIPPKHPNHDRYPYIPRPGEDDDSPVPTVEDIIERFNPYIRED BL:SWS:NREP 2 BL:SWS:REP 109->158|YFAS1_SCHPO|7e-05|36.0|50/189| BL:SWS:REP 141->411|BGH3_HUMAN|9e-13|29.0|238/683| TM:NTM 1 TM:REGION 1->23| NREPEAT 1 REPEAT 2|166->259|314->416| BL:PDB:NREP 1 BL:PDB:REP 123->405|1o70A|7e-09|25.3|269/296| RP:PFM:NREP 2 RP:PFM:REP 125->247|PF02469|2e-08|26.5|114/129|Fasciclin| RP:PFM:REP 262->403|PF02469|3e-12|39.4|127/129|Fasciclin| HM:PFM:NREP 2 HM:PFM:REP 122->247|PF02469|1.3e-15|25.0|120/131|Fasciclin| HM:PFM:REP 270->403|PF02469|3.7e-26|38.0|121/131|Fasciclin| RP:SCP:NREP 2 RP:SCP:REP 111->248|1o70A2|9e-14|20.4|137/156|b.118.1.1| RP:SCP:REP 262->404|1o70A2|3e-17|18.2|137/156|b.118.1.1| HM:SCP:REP 115->248|1o70A1|2.7e-18|26.7|131/140|b.118.1.1|1/2|FAS1 domain| HM:SCP:REP 272->409|1o70A2|3.8e-21|32.6|132/157|b.118.1.1|2/2|FAS1 domain| OP:NHOMO 76 OP:NHOMOORG 63 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------- ------------1121111111112111111111111111111---12112212211-111----------------------------1-111-1111---1-21----4----2------------------------------------------------2--------1---------------1--1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 61.6 SQ:SECSTR ##########################################################################################################################HHHHHHHHTccHHHHHHHTcccE#EEEEEcHHHHHHTcHHHTcHHHHHHHHHHTEEccHHTccccccEEccccEEEEEEEccGGGcEEEEEE#TTEEEE####EEEEEEEcccEEEEEEcccTTccc####ccHHHHHHHcGGGHHHHHHTTTTTTTGGGGccccEEEEEcHHHHHHHHHHHHHHHTcGGGHHHHHHHHHTTEEEEcccccHHHHHHHHHHcccEETTcEEccccEEEEEEEcEETTEEEEEETTEEEEEEEEEEEETTEEEEEEccccccTT###################################### DISOP:02AL 17-29,31-32,442-444| PSIPRED cEEEEEEEHHHHHccEEccccccccccEEEccccccccccccHHcccccccccHHEEEEEEEEEccccccccccccccccccccccEEcHHHHcccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHccccHHHHHHHHHHHEEcccEEHHHHHcccEEEEccccccccccccEEEEEEEccEEEEcccEEEEccccEEcccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccEEEEEEcHHHHHHccHHHHHHHHccccHHHHHHHHHHHcccccEEEccccccccccccccccccEEEEEEcccEEEEEEcccccEEEEEEccEEEEEEEccEEcccEEEEEccEEcccccccccHHHcccccccccccccccHHHHHHcHHHHHccc //