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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02614
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  48/199 : Viruses  0/175   --->[See Alignment]
d.58.7
:488 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   191->293 1wg5A PDBj 4e-04 29.7 %
:RPS:PDB   189->291 2dgqA PDBj 3e-05 10.5 %
:RPS:SCOP  195->292 1x4hA1  d.58.7.1 * 2e-04 14.0 %
:HMM:SCOP  193->307 2cpyA1 d.58.7.1 * 4.5e-06 24.3 %
:BLT:SWISS 116->191 GHR_MOUSE 8e-04 29.7 %
:BLT:SWISS 201->293 HNRH3_HUMAN 2e-04 32.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02617 GT:GENE CIRG_02614 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 488 SQ:AASEQ MAGSAGNNSNNKHWPYAPPTQAHRGPEIGHQLPIQPPIQHHASHQGMNPFNANFTRGNQDHGMQPPIGPPSRSGPIYQNPGSYHNSFQSSAAPNQQDYRGPLIVPPSLKPAPMFGGNIHPAISQKESHRRMEPIREQPTSQTTLAPATPPLARTTFTSNNKDALAQVKDISVANNIITIQGKPFEIPIDDGARYSSPPTGGVLKLMNIPYGISKQEVVHFMGRRAKLLPLHLGTAVHIIMDRSTAKTMDCYVEFLTTANAKETLEWLNRGLPGAPPRLGDRHIDVELSSQDELLKELFPRAKCIVWRDGKPILTRNNDPYSVGFQSFLTAEEVFCMIRNAEMPRRAPFATKCPQRTYEALISTLYKFPWHATTLYSVEDRNALHFACFSQLQTLAARASEKRTLGLDSRLLLDLLNAGLRCPTFTECQKAALYSAANDQTSYKATPETTKFWPFDTLVQKSNATEDNVNNARIQEQRFLQTIGFPALE BL:SWS:NREP 2 BL:SWS:REP 116->191|GHR_MOUSE|8e-04|29.7|74/100| BL:SWS:REP 201->293|HNRH3_HUMAN|2e-04|32.1|81/346| SEG 65->76|ppigppsrsgpi| SEG 404->420|lgldsrllldllnaglr| BL:PDB:NREP 1 BL:PDB:REP 191->293|1wg5A|4e-04|29.7|91/104| RP:PDB:NREP 1 RP:PDB:REP 189->291|2dgqA|3e-05|10.5|95/108| RP:SCP:NREP 1 RP:SCP:REP 195->292|1x4hA1|2e-04|14.0|93/98|d.58.7.1| HM:SCP:REP 193->307|2cpyA1|4.5e-06|24.3|103/0|d.58.7.1|1/1|RNA-binding domain, RBD| OP:NHOMO 49 OP:NHOMOORG 48 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------11-----1111111111111111111111111111111111111111111-----------------------------------------121--------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 105 STR:RPRED 21.5 SQ:SECSTR ############################################################################################################################################################################################cccccccccTTccEEEEccccccccHHHHHHHHTTTccEEETEEEEEEEEEccccccEEEEEEEEEccHHHHHHHHHHHTTTcTTcccTTccccccEEEcccccc################################################################################################################################################################################################### PSIPRED ccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccHHHccccccccccEEEcccccccccccccccccEEcccccccccccccccEEEEccccccccHHHHHHHHHHccccccccccccEEEEEccccccccEEEEEEEcHHHHHHHHHHHHHcccccccccccEEEEEEEccHHHHHHHHHHHHcccEEEccccccccccccccccccccccHHHHHHHHHHccccccccccHHccccHHHHHHHHHHHcccccccEEEHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHccccHHHccccccccHHHccHHHHHHHHHHHHccccccc //