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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02617
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  40/199 : Viruses  0/175   --->[See Alignment]
c.1.8d.92.2
:524 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   99->250 3gh7A PDBj 2e-04 24.3 %
:RPS:PDB   18->276 2cbjA PDBj 2e-08 15.2 %
:RPS:SCOP  67->154 1c7sA4  d.92.2.1 * 2e-06 16.9 %
:RPS:SCOP  163->278 1yhtA1  c.1.8.6 * 7e-11 17.5 %
:HMM:SCOP  20->150 2choA3 d.92.2.3 * 2.4e-07 24.8 %
:HMM:SCOP  151->262 1hp5A1 c.1.8.6 * 1.9e-12 21.4 %
:RPS:PFM   206->355 PF00728 * Glyco_hydro_20 4e-05 28.8 %
:HMM:PFM   206->273 PF00728 * Glyco_hydro_20 1.3e-11 26.5 68/350  
:BLT:SWISS 90->262 HEX1_VIBFU 2e-07 29.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02620 GT:GENE CIRG_02617 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 524 SQ:AASEQ MMTLIHFPNRVDKETWKKSLSSVPKTIYIDSSFTQIKDKDGLTHIPPSAYEFAETFASDLEWISRTSWKLERVDRISKCGKGIYLGKSAGSASKLIYQNGEVTEEAYELEVQNDRTGARGMWWGTRTLLQQLVLSGEDRLMVGRIEDASAYSPRVICLTAVANWYSLLFLKETCTFASFFKCPSFDIILWTTIHLTMALMRLGTGPEDPELNPLVERRNETLSRREFEDLQRHCVSRGVTVIPEIEAPGHALVITRWKPEFINFTAGKAVRIWGTYEPAEHLSIDKKLPSFNTGSITNPTYRENLQWEPSLIDPYNIEEQLDSKSKGLKGATMAAWNDNGYDASTQLEAYYTMKMGIPLLASRSWSGSRGVKLDEAGSTESLWILSDMAPAQSSERWLAVEMNGIDLPDSLVSWKRSDFDQKKGPLIMGLGSKGIDYPLMLDVTGPFTLSSSDSILLLDDSGSLCFLANGISYPLCHVDERDGFDPGHPGRIWINASSSSHEPVKVPLNASITIKTDILSGSLI BL:SWS:NREP 1 BL:SWS:REP 90->262|HEX1_VIBFU|2e-07|29.7|172/611| SEG 449->464|lsssdsilllddsgsl| BL:PDB:NREP 1 BL:PDB:REP 99->250|3gh7A|2e-04|24.3|152/506| RP:PDB:NREP 1 RP:PDB:REP 18->276|2cbjA|2e-08|15.2|244/585| RP:PFM:NREP 1 RP:PFM:REP 206->355|PF00728|4e-05|28.8|132/338|Glyco_hydro_20| HM:PFM:NREP 1 HM:PFM:REP 206->273|PF00728|1.3e-11|26.5|68/350|Glyco_hydro_20| GO:PFM:NREP 1 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF00728|IPR015883| RP:SCP:NREP 2 RP:SCP:REP 67->154|1c7sA4|2e-06|16.9|83/137|d.92.2.1| RP:SCP:REP 163->278|1yhtA1|7e-11|17.5|114/344|c.1.8.6| HM:SCP:REP 20->150|2choA3|2.4e-07|24.8|117/0|d.92.2.3|1/1|beta-N-acetylhexosaminidase-like domain| HM:SCP:REP 151->262|1hp5A1|1.9e-12|21.4|112/0|c.1.8.6|1/2|(Trans)glycosidases| OP:NHOMO 57 OP:NHOMOORG 46 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------1111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1 ---------------2-1111112131111111---1111121111--111132122---------------------------------21--1----------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 328 STR:RPRED 62.6 SQ:SECSTR #################cEEEEccccEEcccEEEEEcTTTccHHHHHHHHHHHHHTTcEEcccccTTcEEEEEEETTcccHHHHHEETTcHHHHTTcccTTccTTcEEEEEETTEEcHHHHHHHHHHHHHHccTTEEccEEEEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHTTccEccEEEETHHHHHHHHHHHHHcEEEEEEccTTccccHHHHHHHHHHHHHHHHTTTccEEEEEcTTccHHHHHHHHHHTHHHHccccccccEEEcccHHHHEETTEEcHHHHHHHccTTcEEEEcccccccccccHHHHHHHHHTccEEEEEcccccTTcTTc################################################################################################################################################################################### DISOP:02AL 524-525| PSIPRED cccHHHccccccHHHccccHHHcccEEEEEcccEEEEccccEEEccccHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccEEEcccccccEEEEccccccccEEEEEEcccccHHHHHHHHHHHHHHHHccccccEEEEEEEEEcccccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEccccccccHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHcccEEccccccccEEccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccHHEEEEEcccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHccccccccccEEEEEccccccccccEEEccccccccccccEEEcccccccccEEEEEEcccEEEcccccEEEEcccccEEEEcccEEcccEEccHHcccccccccEEEEEccccccccEEEEcccEEEEEEEccccccc //