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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02909
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  25/915 : Eukaryota  62/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:349 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   110->317 2aowA PDBj 2e-12 14.1 %
:RPS:SCOP  157->272 1xxlA  c.66.1.41 * 2e-11 20.6 %
:HMM:SCOP  110->317 1hnnA_ c.66.1.15 * 2.4e-17 25.4 %
:RPS:PFM   145->274 PF08003 * Methyltransf_9 2e-04 26.5 %
:HMM:PFM   158->268 PF08241 * Methyltransf_11 4.3e-10 30.1 93/95  
:BLT:SWISS 227->347 MET7B_RAT 6e-11 40.4 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02912 GT:GENE CIRG_02909 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 349 SQ:AASEQ MGRMGRRIILPPRLRSFHFLPVNIAPSKHQAFISQQQHVFLAPISNQGTKQSTAPRDNMSDMMVPPTFCQRVNDLAEPAPLLLGSAWNFTVVFLDTVFRRGELLAPVLRMSQIRAEGFSRFWIKFSGARDPASSIPAERVGSSALMPALLSTASGVILDIGPGTGTQMPLLTSPDIKAIYGAEPTDGLHTDLLAKIDSCGLSSKYQILHCGAEPQSLIPALDKAGFKELGSGVFDTIICVRVLCSVPRPEETIQGLYRLLKPGGKLLIAEHVVNPWCTRQGSIVGRLAQLFYTLLGWPFFMGSCDMNRDTGKMLRKAAERDGGWASDTLKTSFAWGPMPYVSGILVKRS BL:SWS:NREP 1 BL:SWS:REP 227->347|MET7B_RAT|6e-11|40.4|109/244| RP:PDB:NREP 1 RP:PDB:REP 110->317|2aowA|2e-12|14.1|198/288| RP:PFM:NREP 1 RP:PFM:REP 145->274|PF08003|2e-04|26.5|117/303|Methyltransf_9| HM:PFM:NREP 1 HM:PFM:REP 158->268|PF08241|4.3e-10|30.1|93/95|Methyltransf_11| GO:PFM:NREP 2 GO:PFM GO:0002098|"GO:tRNA wobble uridine modification"|PF08003|IPR010017| GO:PFM GO:0016300|"GO:tRNA (uracil) methyltransferase activity"|PF08003|IPR010017| RP:SCP:NREP 1 RP:SCP:REP 157->272|1xxlA|2e-11|20.6|102/234|c.66.1.41| HM:SCP:REP 110->317|1hnnA_|2.4e-17|25.4|185/0|c.66.1.15|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 100 OP:NHOMOORG 89 OP:PATTERN -----------------------------------------------------------11------- ---------------11----1----------------------------------------------------------------------------------------------------------------------------2--1-----------------111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2----1-------1--------11----------------------------------------------------------------------------------------------------1-------------------------------------------------------11-1-----------------------------------1------------------1--------------------------------------------------------------------------------------------------------------------1------------------------------1111----1--------------------------------------------------------------------------------------------------------- ----21--------11221211111121--1-111111111111-1121-11211-111111---------------------------1-121-1------1-------1------1-------1--------11-----------------------------------------------2--1111-11------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 257 STR:RPRED 73.6 SQ:SECSTR ###########################################################################################EEcccccccccTTcccTTcccGGHHHHHHHHTTccHHHHHHHHTHHHHTHHHHGGGccTTcccEEEEEEccTTHHHHHHHHHHHHHHcTTccEEEEEEcccHHHHHHHHHHHHTccccTTEEEEEEcccHHHHHHHHHccccEEEEEEEccGGGcccHHHHHHHHHTTEEEEEEEEEEEEccccHHHHTcEEEEHHHHHGGGccccTTTTcccccHHHHHHHHHHHEEETTTEEEEEEEEEEEEccccccccEEEEE# DISOP:02AL 25-25,31-31,34-34,59-70,73-74| PSIPRED ccccccEEEEccccccEEEEEEEccccHHHHHHHcccEEEEEEEcccccccccccccccccccccHHHHHHHHcccccccEEEEEcccccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHcccccEEEEEEccHHHHHHHHHHHHHccccccEEEEEcccccccHHHHcccHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHcccccEEEEEEccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccEEEEEccccccccccEEEEEEEEcc //