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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02925
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  168/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:485 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   56->354 3c96A PDBj 5e-23 17.9 %
:RPS:SCOP  187->354 3c96A1  c.3.1.2 * 1e-09 14.7 %
:HMM:SCOP  33->413 1k0iA1 c.3.1.2 * 1.7e-37 25.8 %
:RPS:PFM   186->453 PF08491 * SE 3e-82 57.6 %
:HMM:PFM   186->461 PF08491 * SE 4.2e-99 50.0 272/276  
:HMM:PFM   36->66 PF01266 * DAO 1.7e-09 54.8 31/358  
:BLT:SWISS 56->485 ERG1_SCHPO e-103 45.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02928 GT:GENE CIRG_02925 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 485 SQ:AASEQ MASQPLTNGLTNGSAHPKKQYRDAAEERRCEQHQADIVIIGAGIAGCSLAVALGNQGRSVLLLEKSLKEPDRIVGELLQPGGVLALEKLGLRHCLEDIDAVKVLGYNVIYHGAPVRIDFPMDSNEKLFEGRSFHHGRFIMKLREAAMSTPNVTVVETKAVSLVKSTHGEGVLGVECLTNGKKDFFFAPLTVVADGYNSAFRKEFLPHAPRVKSKFWGLELIDADLPMPCYGHVVLSDSPPILLYQIGTHETRALVDIPENLPSASVKNGGVKGHLRNTVLPSLPKSIQPSFAAAIDRGGLRSMPNSFLPPATNKTPGLMFLGDSLNMRHPLTGGGMTVAFNDIVALRELLSPEAVPNFSDTNLVLKQLSKFHWKRKDSSSAINILAQSLYALFAAGNSDLKVLQRGCFRYFQLGILDGPIGLLSGLVHRPLVLFRHFYSVAFLSIWLLLRSAPPYMLPLTIFQCISVFITACRVILPFIFAELKN BL:SWS:NREP 1 BL:SWS:REP 56->485|ERG1_SCHPO|e-103|45.5|424/457| TM:NTM 3 TM:REGION 35->56| TM:REGION 430->452| TM:REGION 458->480| SEG 35->46|adiviigagiag| RP:PDB:NREP 1 RP:PDB:REP 56->354|3c96A|5e-23|17.9|296/381| RP:PFM:NREP 1 RP:PFM:REP 186->453|PF08491|3e-82|57.6|264/272|SE| HM:PFM:NREP 2 HM:PFM:REP 186->461|PF08491|4.2e-99|50.0|272/276|SE| HM:PFM:REP 36->66|PF01266|1.7e-09|54.8|31/358|DAO| GO:PFM:NREP 4 GO:PFM GO:0004506|"GO:squalene monooxygenase activity"|PF08491|IPR013698| GO:PFM GO:0016021|"GO:integral to membrane"|PF08491|IPR013698| GO:PFM GO:0050660|"GO:FAD binding"|PF08491|IPR013698| GO:PFM GO:0055114|"GO:oxidation reduction"|PF08491|IPR013698| RP:SCP:NREP 1 RP:SCP:REP 187->354|3c96A1|1e-09|14.7|156/269|c.3.1.2| HM:SCP:REP 33->413|1k0iA1|1.7e-37|25.8|267/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 233 OP:NHOMOORG 169 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------- ----11--211-11111111111111211111111111111111111111111111111111111111-1111111112111111111-12112211111111223-1-212211221111111221111B1-112-1112111111111111211111---1111--------11111811111125H161------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 413 STR:RPRED 85.2 SQ:SECSTR ##############################################HHHHHHHHHTccEEEEEEccTccccccccEEEcHHHHHHHHHTTcHHHHHcHHcEEEcEEEEEcTTccEEEEEEcGGGGTcccEEEEEHHHHHHHHHHHHHHHcTTcEEEcEEEEEETEEETTEEEEEEEETTccEEEEEEcEEEEcccTTcHHHHHHcTTccccEEEEEEEEEEEEEEcEcTTccEEEEEEccHHHHTTTcEEEEEEEEEEHHHHccccccccTHHHHHHHHTTcccTTccHHHHHHTccEEEEEEEEEcccccccccTTEEEcTHHHHcccccTTcTHHHHHHHHHHHHHHHHHcccccTTccTTccTTHHHHHHHHHHHHHTTTccHHHHHHHHHHHGGGHHHHHHHHHHTHHHHcGGGGHHHHHHHHHHTccccHHHcHHHHHHHHHHTTcccccccGG########################## DISOP:02AL 484-486| PSIPRED ccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHcccEEEEEEcccccccccEEEcccccHHHHHHHcccHHHHHHcccEEEEEEEEEEcccEEEEEcccccccccccEEEEEHHHHHHHHHHHHHccccEEEEEEEEEEEEEccccccEEEEEEEccccEEEEEccEEEEcccccHHHHHHHcccccccccEEEEEEEEEccccccccEEEEEccccEEEEEEcccccEEEEEEEccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEHHccccccEEEccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHccccccEEEEEHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc //