[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02930
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  143/199 : Viruses  0/175   --->[See Alignment]
f.39.1
:423 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  146->231 1s7bA_ f.39.1.1 * 1.7e-05 22.1 %
:RPS:PFM   156->387 PF06027 * DUF914 9e-59 49.3 %
:HMM:PFM   153->391 PF06027 * DUF914 2.1e-85 39.4 236/335  
:BLT:SWISS 156->398 YCN8_SCHPO 3e-70 54.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02933 GT:GENE CIRG_02930 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 423 SQ:AASEQ MADTNNKGADIVESPVTSGRTSPRNDRPNGDEHEGNGSHQDVTVAEALDESKKGNFAYFHTRGFYDPGTYSNHGEEPFTNPLSRGMEQPFLLFRLSLITFFSTWSIRAILYTVMGSRTGADLSTKADGNFRELYSPKNEIYMTNKLRLLTGCFADMIFAFFDVEGNYFVVKAYQYTTILSAQLINFWAIVIVVAVSFLLLRVRYHWAQYIGIIVCIGGMGVLFGSDHITGSTAGEQKSRGDQIKGDLFALLGATCYGFANVTEEYLVSKRPLYEVLGQLGLYATVIMGVQAAIFDRGSFQTANWTGEVGGYLTGYTICLFIFYSLAPILFRLASAAFFNISLLTSNFWGVVIGVKVFQYTIHWMYPIAFVLIVIGQCIYYLGRRVLGEATKPWLGRNQEKGVAGVGTAKKKINSNAGGVANVV BL:SWS:NREP 1 BL:SWS:REP 156->398|YCN8_SCHPO|3e-70|54.7|234/505| TM:NTM 8 TM:REGION 90->112| TM:REGION 147->169| TM:REGION 179->201| TM:REGION 206->228| TM:REGION 247->268| TM:REGION 274->296| TM:REGION 318->340| TM:REGION 354->376| SEG 210->221|igiivciggmgv| SEG 400->411|kgvagvgtakkk| RP:PFM:NREP 1 RP:PFM:REP 156->387|PF06027|9e-59|49.3|229/255|DUF914| HM:PFM:NREP 1 HM:PFM:REP 153->391|PF06027|2.1e-85|39.4|236/335|DUF914| HM:SCP:REP 146->231|1s7bA_|1.7e-05|22.1|86/106|f.39.1.1|1/2|Multidrug resistance efflux transporter EmrE| OP:NHOMO 230 OP:NHOMOORG 143 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----111-21-----1111111112111111111111111-1111111111111111111111-----------------------11-1211111----1--321-1-12442221211222243131492-334222121132221112123122221121111-----1111--1-611--114331521-2222- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 423-424| PSIPRED cccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEEEEEEcccccccccHHHHHcccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccccccEEEEEcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHEEcHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHcc //