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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02933
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  65/199 : Viruses  0/175   --->[See Alignment]
b.55.1
:275 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->136 2qkmG PDBj 5e-10 30.3 %
:RPS:PDB   40->124 1ddwA PDBj 3e-05 11.1 %
:RPS:SCOP  18->146 1q67A  b.55.1.7 * 3e-13 22.7 %
:HMM:SCOP  18->165 1q67A_ b.55.1.7 * 7.8e-33 37.3 %
:RPS:PFM   13->138 PF06058 * DCP1 1e-20 46.7 %
:HMM:PFM   13->139 PF06058 * DCP1 2.1e-20 33.3 108/123  
:BLT:SWISS 17->165 DCP1B_MOUSE 3e-11 29.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02936 GT:GENE CIRG_02933 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 275 SQ:AASEQ MATNSLAVSPPTRSNEELNITVVRRYNPSISTILSLAQFAVVYIFSATTQTWEKLGIEGTLFVCQRTKGDLGEERYSVMVLNRRGMDNFEARLENGDDVEITDEYVILKADDDKGREGAIRAANGRTSMIYGLWIFSEPAPSSTAETRTLNAQMIKECAVHGGESRKLAEERLAAERNQNMLVEEAPSATPMNRQISLKELFGQQRAQDDAWSVKVHSPVAEFNPQAQPQGPTNQPVGWPAPQGVPPGLLPGAPNGNDVLGDLFRKAGIGHQGYS BL:SWS:NREP 1 BL:SWS:REP 17->165|DCP1B_MOUSE|3e-11|29.2|130/578| SEG 240->257|papqgvppgllpgapngn| BL:PDB:NREP 1 BL:PDB:REP 18->136|2qkmG|5e-10|30.3|99/127| RP:PDB:NREP 1 RP:PDB:REP 40->124|1ddwA|3e-05|11.1|81/109| RP:PFM:NREP 1 RP:PFM:REP 13->138|PF06058|1e-20|46.7|107/121|DCP1| HM:PFM:NREP 1 HM:PFM:REP 13->139|PF06058|2.1e-20|33.3|108/123|DCP1| RP:SCP:NREP 1 RP:SCP:REP 18->146|1q67A|3e-13|22.7|128/146|b.55.1.7| HM:SCP:REP 18->165|1q67A_|7.8e-33|37.3|126/207|b.55.1.7|1/1|PH domain-like| OP:NHOMO 66 OP:NHOMOORG 65 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------111111111111111111111111111111111111-1111111-1111----------------------1--1-1--1--------1111----------1--------2---------------------------------------1--------------------1---1---11111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 119 STR:RPRED 43.3 SQ:SECSTR #################HHHHHHHHHcccccEEEEEEEEEEEEEEcTTTcccEEEcccccEEEEEEEEcEEETTTTEEEEEEEETTEEEEEEEccTTccEEccccEEEEEETTTTEEEEEEccccTTccEEEEEEc########################################################################################################################################### DISOP:02AL 274-276| PSIPRED ccccccccccccccccEEHHHHHHHHcHHHHHHHHHcccEEEEEEcccccccccccccEEEEEEEEccccccccEEEEEEEEcccccccEEcccccccEEEEcccEEEEccccccccccHHHcccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHcccccccHHcccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHccccccccc //