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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02937
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  47/199 : Viruses  0/175   --->[See Alignment]
b.40.4
:164 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   30->113 1ue6C PDBj 1e-05 37.2 %
:RPS:PDB   31->133 3eivB PDBj 2e-11 23.0 %
:RPS:SCOP  31->133 1ue1A  b.40.4.3 * 3e-11 29.0 %
:HMM:SCOP  26->161 1se8A_ b.40.4.3 * 1e-18 23.9 %
:RPS:PFM   31->119 PF00436 * SSB 2e-07 32.6 %
:HMM:PFM   30->122 PF00436 * SSB 1.9e-13 31.1 90/104  
:BLT:SWISS 11->145 RIM1_YEAST 9e-08 23.7 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02940 GT:GENE CIRG_02937 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 164 SQ:AASEQ MFGLSRFAPTLRTASLRRAFSASTSRSHATITIAGPLGAAPELKTSQNGRQYIRYIVGSKNSMTQEMTWFRVLSFTEAEKSQNYLLGLEKGTIMHVEGEPSITSLETPEGQKKYNFNVVQRRHTVLSRPRQRQFKDAEQDQSTEQGQSAEQPTEHDQSPKQEAH BL:SWS:NREP 1 BL:SWS:REP 11->145|RIM1_YEAST|9e-08|23.7|131/135| BL:PDB:NREP 1 BL:PDB:REP 30->113|1ue6C|1e-05|37.2|78/106| RP:PDB:NREP 1 RP:PDB:REP 31->133|3eivB|2e-11|23.0|100/111| RP:PFM:NREP 1 RP:PFM:REP 31->119|PF00436|2e-07|32.6|86/104|SSB| HM:PFM:NREP 1 HM:PFM:REP 30->122|PF00436|1.9e-13|31.1|90/104|SSB| GO:PFM:NREP 1 GO:PFM GO:0003697|"GO:single-stranded DNA binding"|PF00436|IPR000424| RP:SCP:NREP 1 RP:SCP:REP 31->133|1ue1A|3e-11|29.0|100/113|b.40.4.3| HM:SCP:REP 26->161|1se8A_|1e-18|23.9|134/0|b.40.4.3|1/1|Nucleic acid-binding proteins| OP:NHOMO 49 OP:NHOMOORG 47 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------1-111111111111111111112111211111111111111111111-------------------------------------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 118 STR:RPRED 72.0 SQ:SECSTR #####################ccTTcccccEEEEEEEccccEEEEcTTccEEEEEEEEEccccccccEEEEEEEEHHHHHHHHHHHHccTTcEEEEEEEEEEEEEEcTTccEEEEEEEEEEEEEEcccccccc##HHHHTc####################### PSIPRED cccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccEEEEcccccEEEEEEEEEcccccccccEEEEEEEEcHHHHHHHHHHcccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEEEccccccccccccccccccccccccccccccccHHHcc //