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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02948
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  907/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:1537 amino acids
:PSIPRED
:BLT:PDB   618->847 2cbzA PDBj 2e-64 52.4 %
:BLT:PDB   1053->1515 2hydA PDBj 1e-44 29.4 %
:RPS:PDB   462->585 2bnlB PDBj 3e-08 11.3 %
:RPS:PDB   619->833 3b5jA PDBj 5e-31 28.4 %
:RPS:PDB   1025->1520 3b60A PDBj 4e-62 19.4 %
:RPS:SCOP  284->591 2hydA2  f.37.1.1 * 4e-16 14.0 %
:RPS:SCOP  606->849 1q3hA  c.37.1.12 * 9e-27 32.8 %
:RPS:SCOP  977->1257 1pf4A2  f.37.1.1 * 5e-34 11.5 %
:RPS:SCOP  1286->1517 1b0uA  c.37.1.12 * 1e-34 23.5 %
:HMM:SCOP  278->610 1pf4A2 f.37.1.1 * 2.3e-36 17.7 %
:HMM:SCOP  598->830 1pf4A1 c.37.1.12 * 4.9e-46 28.4 %
:HMM:SCOP  917->1268 1pf4A2 f.37.1.1 * 4.2e-62 20.9 %
:HMM:SCOP  1265->1507 1pf4A1 c.37.1.12 * 2.1e-59 36.0 %
:RPS:PFM   301->493 PF00664 * ABC_membrane 8e-07 22.2 %
:RPS:PFM   644->683 PF03193 * DUF258 2e-04 50.0 %
:RPS:PFM   1017->1233 PF00664 * ABC_membrane 1e-14 26.9 %
:RPS:PFM   1327->1451 PF00005 * ABC_tran 5e-08 40.5 %
:HMM:PFM   298->571 PF00664 * ABC_membrane 3.7e-47 18.1 271/275  
:HMM:PFM   966->1236 PF00664 * ABC_membrane 2.9e-36 15.6 270/275  
:HMM:PFM   661->769 PF00005 * ABC_tran 3.9e-14 31.7 101/118  
:HMM:PFM   1327->1451 PF00005 * ABC_tran 7e-20 41.6 113/118  
:HMM:PFM   1422->1492 PF02463 * SMC_N 8.1e-07 30.0 70/220  
:HMM:PFM   637->673 PF03193 * DUF258 9.3e-05 41.7 36/161  
:BLT:SWISS 28->1526 YCFI_YEAST 0.0 51.3 %
:PROS 744->758|PS00211|ABC_TRANSPORTER_1
:PROS 1423->1437|PS00211|ABC_TRANSPORTER_1
:TM
:REPEAT 2|324->854|991->1531
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02951 GT:GENE CIRG_02948 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 1537 SQ:AASEQ MADNAYSQVILGDFSADSEPFSNRHQPLCRDPEGWGPISSGRYDFTPCFMDTWILFVSVWGLLMGAGALWLLLRRRTAQPVQKNWHFYAKLSLIWVIFFLVALQASLQVESFPGVWFQDFRFWSTILLLASLVVIYMAQYYEHWRSRQPNGVVLFYWVFYIIAHAVKLRSLISRKAYQDRLPYFVIFNVNLGVAILEFVLEYMVPKKQSAYDALGDEDECPYEYADIFSVLTFSWMTPLMKYGYKNFLTQDDLWNLRKRDTTRVTGDQLEKVWDAELKKKGPSLWRALFKAFGGPYFRGALVKTWSDIFAFAQPQLLRFLILFIDSYRGENPQPVVRGLAIALGMFGVSVVQTICLHQYFQRAFETGMRVKSSLTAMIYTKSLKLSNEGRASKSTGDIVNYMAVDQQRLSDLAQFGMQLWSAPFQIVLCMVSLYQLVGLSMLAGIGAMILMIPLNGLIAKVMKNLQIKQMRNKDRRTRLMTEILNNMKSIKLYAWNAAFMNMLNHVRNDLELNTLRKIGATQSVANFTWSSTPFLVSCSTFAVFVLTNDKPLTTEIVFPALTLFNLLTFPLSILPMVITSIIEASVAVNRLKTFFTADELQTDAVLRQDPVSHGGDESVRIRDATFTWDRHEGRRVLENIDFSARKGELSCIVGRVGAGKSSLLQALLGDLWKINGEVIMRGRVAYVAQQAWVMNASVRENIVFGHRWDPHFYNLTVEACALLDDFQILPDGDQTEVGERGISLSGGQKARLTLARAVYARADIYLLDDVLSAVDQHVGRHIINRVLGRTGILCGKTRILATNSIPVLKEADFIGLLRSGTIIEKGTYEQLLAMKGEVAGLVRSAVSEDGSASSESTREDDSPRTSEALTAIETSDDENLSEVEEAQERLAPLAPMRSGGGTIRRGSMATLRRASTASPENPRTKFIDEETGIKTKQTKEVAEQGKVKWSVYGEYAKTSNLYAVALYLVALLAAHSMQVAGSFWLKKWSEINEIEGRNPSIGKYIGIYFAFGIGSSALVILQTLILWIFCSIEASRKLHERMAFAIFRSPMSFFETTPAGRILNRFSSDIYRVDEILARTFNMLFTNSARAMFTMIVIAISTPLFLVLIVPLGFVYFSYQSYYLRTSRELKRLDSITKSPIFAHFQETLGGISTIRAFRQQKRFALENEWRTDANLRAYFPSINANRWLAVRLEFIGSVVILGAASLSIISVATGSKLTAGMVGLAMSYALNITQSLNWIVRQTVEVETNIVSVERVLEYANLPSEAPDVIFKHRPALSWPSQGGVTFDHYSTRYREGLDLVLKDVCLEIKPHEKIGVVGRTGAGKSSLTLALFRIIEAAEGRICIDGLNISSIGLFDLRGRLAIIPQDAALFEGTVRDNLDPRHVHDDTELWSVLEHARLRDHVAGMPGQLDAQVHEGGSNLSQGQRQLVSLARALLTPSNILVLDEATAAVDVETDALLQQMLRSSIFQNRTIITIAHRINTILDSDRIVVLDRGRVVEFDSPAELIKRGGQFYTLVKEAGLLDGGESATLSSTS BL:SWS:NREP 1 BL:SWS:REP 28->1526|YCFI_YEAST|0.0|51.3|1470/1515| PROS 744->758|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 1423->1437|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 13 TM:REGION 50->72| TM:REGION 86->108| TM:REGION 120->142| TM:REGION 151->167| TM:REGION 181->203| TM:REGION 433->455| TM:REGION 522->544| TM:REGION 562->584| TM:REGION 961->983| TM:REGION 1007->1029| TM:REGION 1094->1116| TM:REGION 1191->1213| TM:REGION 1221->1243| NREPEAT 1 REPEAT 2|324->854|991->1531| SEG 61->78|gllmgagalwlllrrrta| SEG 961->974|lyavalylvallaa| BL:PDB:NREP 2 BL:PDB:REP 618->847|2cbzA|2e-64|52.4|229/230| BL:PDB:REP 1053->1515|2hydA|1e-44|29.4|445/578| RP:PDB:NREP 3 RP:PDB:REP 462->585|2bnlB|3e-08|11.3|123/126| RP:PDB:REP 619->833|3b5jA|5e-31|28.4|211/243| RP:PDB:REP 1025->1520|3b60A|4e-62|19.4|489/572| RP:PFM:NREP 4 RP:PFM:REP 301->493|PF00664|8e-07|22.2|190/274|ABC_membrane| RP:PFM:REP 644->683|PF03193|2e-04|50.0|40/160|DUF258| RP:PFM:REP 1017->1233|PF00664|1e-14|26.9|208/274|ABC_membrane| RP:PFM:REP 1327->1451|PF00005|5e-08|40.5|111/123|ABC_tran| HM:PFM:NREP 6 HM:PFM:REP 298->571|PF00664|3.7e-47|18.1|271/275|ABC_membrane| HM:PFM:REP 966->1236|PF00664|2.9e-36|15.6|270/275|ABC_membrane| HM:PFM:REP 661->769|PF00005|3.9e-14|31.7|101/118|ABC_tran| HM:PFM:REP 1327->1451|PF00005|7e-20|41.6|113/118|ABC_tran| HM:PFM:REP 1422->1492|PF02463|8.1e-07|30.0|70/220|SMC_N| HM:PFM:REP 637->673|PF03193|9.3e-05|41.7|36/161|DUF258| GO:PFM:NREP 14 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0003924|"GO:GTPase activity"|PF03193|IPR004881| GO:PFM GO:0005525|"GO:GTP binding"|PF03193|IPR004881| GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 4 RP:SCP:REP 284->591|2hydA2|4e-16|14.0|303/323|f.37.1.1| RP:SCP:REP 606->849|1q3hA|9e-27|32.8|239/265|c.37.1.12| RP:SCP:REP 977->1257|1pf4A2|5e-34|11.5|244/276|f.37.1.1| RP:SCP:REP 1286->1517|1b0uA|1e-34|23.5|230/258|c.37.1.12| HM:SCP:REP 278->610|1pf4A2|2.3e-36|17.7|310/311|f.37.1.1|1/2|ABC transporter transmembrane region| HM:SCP:REP 598->830|1pf4A1|4.9e-46|28.4|229/244|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 917->1268|1pf4A2|4.2e-62|20.9|311/311|f.37.1.1|2/2|ABC transporter transmembrane region| HM:SCP:REP 1265->1507|1pf4A1|2.1e-59|36.0|239/244|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 25753 OP:NHOMOORG 1172 OP:PATTERN 5421764598879888E876476CO79EIAG983758375453DCGFL9EYPD39CA8C658619-12 EBR8nIKLTTQGDDCFF99-9K33KZ99999DJKKLThig7XEfSXTJRIK7RTY8DN55NRMJeLWokwJIFFFNMKNBpPC73576EFB81778F--99HA87LDIEH233333223233336DCBFKDDGGHHGQQTT99Aa8WLQWKLLIGKKMBFDFDMKGSglnK8JECAB8H8DA9EBH88UL6KJSdefdfdkkUejfdfoldWWWaihiLPTigTYXZYXXUywMKKMLMLILLLLKKKIJIFJdWLTfiSGWMaZZIJhlMIDKRTSOSVWZcWSWcWYRVTSOMSUOTTMONMNNOOQNOMNaaYWTTaabTSaSUfYZYceYWLaOQYXXASRPpMPXZcSTJ6uqVKHHQJBHUROTGGGH7HGCCCDGBCEGA*x*KFLZZSdLbcbfeahbYc*-NQkOKlSYo*D8************ndBABSW*ZYcdXXaEEEEEEEEHGKAIKIX33445333445745785666575566283A88B89XmkUlUWYaZYSNLNKVVbqSQSRFTdX*YSZP38PPUXGPNHURhai*HOHAF7DKF6899999CE9KKDHKb8KCLNAHUEEH4EFCHBGGGJDCDCOPAP887B87787753334434445B988FEPNMCO5E7B9VDIJKFCFFFFEFCHEIJFD--A9GD9222222dOjbGSSLPPRMRRTNL-OLKKNLOKPOPUPLLLLLPekjhhPTMNMILMLLMLLLLMLLLaJHGKLKKE4YUWVWXUSVUXV226557545BDEC94TRcECCHGB8DCDDD9AEACEDC9G98ENNOSUPUhZiVXbRSJggl7676777668JOMWPQQQPRaRWYCGHBECBEFG999932DGAA786612121121*2L76658-6541784343549425334EJPHBKXMRI5D9 55ADSNI-WE67PSMHLOJNPTThYnOGGDEFEQSOFLPKPIHCCCUQPcWeddMKUMLHHIHGB7892E95EAEBB2ED7AA9FD69-RoDLKONFFFKDCKRQI6F*c*UiSocrNKLMMVKikK*J**c1qU*MLJJdJO*dIOLLFWMH*KULRcNf*KoRWUiSU*pg*cCKDC*8A9HEffe*Jm*FJ*syyZ ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ PSIPRED ccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEEcccccccccccccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEEcEEEEEEcccccccccHHHHHHccccccHHHHHHHHHHHccHHHHHHcccccccEEccccccccHHHHHHHHHHHHHHccccEEEEccHHHHccHHHHHHHHHHHHcHHHHHccccEEEEcccHHHHHHccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHcccccccccccHHHHHHHHcccHHccccccccccccHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEEEEccccccEEcccEEEEccccEEEEEccccccHHHHHHHHHHHccccccEEEEccEEHHHccHHHHHHHccEEccccEEEcccHHHHccccccccHHHHHHHHHHcccHHHHHHccccccEEEccccccccHHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHcccEEEEEEccEEEEcccHHHHHHcccHHHHHHHHHHHHccccHHHHcccc 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