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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02962
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  114/199 : Viruses  0/175   --->[See Alignment]
a.38.1
:288 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   164->216 1an4A PDBj 4e-08 45.3 %
:RPS:PDB   164->219 1am9C PDBj 2e-11 37.5 %
:RPS:SCOP  165->212 1an2A  a.38.1.1 * 6e-14 35.4 %
:HMM:SCOP  162->245 1r05A_ a.38.1.1 * 9.2e-16 33.3 %
:RPS:PFM   166->213 PF00010 * HLH 4e-08 52.1 %
:HMM:PFM   165->213 PF00010 * HLH 7.2e-16 46.9 49/54  
:BLT:SWISS 134->263 YAWC_SCHPO 2e-25 44.9 %
:PROS 271->283|PS00018|EF_HAND_1
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02965 GT:GENE CIRG_02962 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 288 SQ:AASEQ MSDNIGSISTADGKRKRESLDAGDSQRLARSPPMANTNANMHPNNGNIHGYDTHGLNNPTELSHIDQQLLQHVGGQNGVSDDNAMTAKAALAAHPQPKFSAPESAFDNNALGHNIAAFGEDVTQVAMPGVHGHNSTAAAVYAAREAQSISHSKPPVGSPEWHTQRKNNHKEVERRRRETINEGINELAKLVPGCEKAKGSILQRAVQYISKLQEDNKTMVDRWDTTQMTTTQAIAEISAQNAKLKAEVNRRGVLAMKWLQRCREAGLDFPDYDDDKDLSQLEIDDVQI BL:SWS:NREP 1 BL:SWS:REP 134->263|YAWC_SCHPO|2e-25|44.9|127/201| PROS 271->283|PS00018|EF_HAND_1|PDOC00018| SEG 268->277|dfpdydddkd| BL:PDB:NREP 1 BL:PDB:REP 164->216|1an4A|4e-08|45.3|53/65| RP:PDB:NREP 1 RP:PDB:REP 164->219|1am9C|2e-11|37.5|56/82| RP:PFM:NREP 1 RP:PFM:REP 166->213|PF00010|4e-08|52.1|48/54|HLH| HM:PFM:NREP 1 HM:PFM:REP 165->213|PF00010|7.2e-16|46.9|49/54|HLH| GO:PFM:NREP 2 GO:PFM GO:0030528|"GO:transcription regulator activity"|PF00010|IPR001092| GO:PFM GO:0045449|"GO:regulation of transcription"|PF00010|IPR001092| RP:SCP:NREP 1 RP:SCP:REP 165->212|1an2A|6e-14|35.4|48/86|a.38.1.1| HM:SCP:REP 162->245|1r05A_|9.2e-16|33.3|84/87|a.38.1.1|1/1|HLH, helix-loop-helix DNA-binding domain| OP:NHOMO 145 OP:NHOMOORG 114 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------111111111111111111111111131111112111111111-1111111111111-1111111111111111-1--1211111------1112-----52211-1----1-22-3-362-21--11-21-11-1---11-2---1-----11-----4--2---------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 140 STR:RPRED 48.6 SQ:SECSTR #################################################################################################################TEEEcc#GGG#####TcccHHHHHHHHHHHHHHHHHHTTcccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTcTTHHHTTccccccccEETcc##HHHHHTc########################### DISOP:02AL 288-289| PSIPRED cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHccc //