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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02979
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  0/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
f.41.1
:479 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->465 3dknA PDBj 2e-64 33.8 %
:RPS:PDB   8->115,265->465 3dknA PDBj 3e-69 23.3 %
:RPS:SCOP  10->465 1rh5A  f.41.1.1 * e-154 37.2 %
:HMM:SCOP  8->467 1rh5A_ f.41.1.1 * 2.6e-123 37.4 %
:RPS:PFM   41->75 PF10559 * Plug_translocon 5e-13 80.0 %
:RPS:PFM   76->454 PF00344 * SecY 6e-29 38.9 %
:HMM:PFM   76->460 PF00344 * SecY 4.3e-98 36.0 325/341  
:HMM:PFM   41->75 PF10559 * Plug_translocon 1e-20 71.4 35/35  
:BLT:SWISS 1->478 SC61A_NEUCR 0.0 85.3 %
:PROS 76->95|PS00755|SECY_1
:PROS 166->184|PS00756|SECY_2
:TM

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02982 GT:GENE CIRG_02979 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 479 SQ:AASEQ MSGLRFLDLIKPFTPLLPEVAAPETKVPFNQKLMWTGLTLLIFLVMSQMPLYGIVSSDTSDPLYWLRMMLASNRGTLMELGITPIISSGMVFQLLAGTHLIDVNLDLKTDRELYQTAQKLFAIILSFGQACVYVLTGLYGQPSDLGAGICVLLIVQLVVAGLVVILLDELLQKGYGLGSGISLFIATNICESIMWKAFSPTTYNTGRGPEFEGAVIALFHLLLTWKDKQRALHEAFYRQNLPNIMNLLATLIVFAAVIYLQGFRVEIPVKSSRQRGMRGSYPVRLFYTSNMPIMLQSALCSNIFLISQMLYSRFSDNLLVRLLGVWEPREGGSAQLHASSGIAYYMSPPLNFKEALLDPIHTAVYVAFMLVACALFSKTWIEVSGSAPRDVAKQLKDQGLVMAGHREQSMYKELKRVIPTAAAFGGACIGALSVASDLLGALGSGTGILLAVTIIYGYFEIAAREGDFGAGLKGLVPGN BL:SWS:NREP 1 BL:SWS:REP 1->478|SC61A_NEUCR|0.0|85.3|476/476| PROS 76->95|PS00755|SECY_1|PDOC00612| PROS 166->184|PS00756|SECY_2|PDOC00612| TM:NTM 10 TM:REGION 32->54| TM:REGION 78->100| TM:REGION 118->140| TM:REGION 145->167| TM:REGION 169->191| TM:REGION 206->226| TM:REGION 242->264| TM:REGION 357->379| TM:REGION 417->439| TM:REGION 441->462| BL:PDB:NREP 1 BL:PDB:REP 12->465|3dknA|2e-64|33.8|414/430| RP:PDB:NREP 1 RP:PDB:REP 8->115,265->465|3dknA|3e-69|23.3|296/430| RP:PFM:NREP 2 RP:PFM:REP 41->75|PF10559|5e-13|80.0|35/35|Plug_translocon| RP:PFM:REP 76->454|PF00344|6e-29|38.9|316/337|SecY| HM:PFM:NREP 2 HM:PFM:REP 76->460|PF00344|4.3e-98|36.0|325/341|SecY| HM:PFM:REP 41->75|PF10559|1e-20|71.4|35/35|Plug_translocon| GO:PFM:NREP 3 GO:PFM GO:0015031|"GO:protein transport"|PF00344|IPR002208| GO:PFM GO:0015450|"GO:P-P-bond-hydrolysis-driven protein transmembrane transporter activity"|PF00344|IPR002208| GO:PFM GO:0016020|"GO:membrane"|PF00344|IPR002208| RP:SCP:NREP 1 RP:SCP:REP 10->465|1rh5A|e-154|37.2|406/410|f.41.1.1| HM:SCP:REP 8->467|1rh5A_|2.6e-123|37.4|420/422|f.41.1.1|1/1|Preprotein translocase SecY subunit| OP:NHOMO 440 OP:NHOMOORG 263 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111-11 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1111111-31111111111111111111111111111111111111211111111111111122222212212222212222222222-1411111111111122411112222224222222254362GM2-7432121222322222122222231111512111112211111111I1111124541341211111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 429 STR:RPRED 89.6 SQ:SECSTR #######cccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccTTTHHHHcccTTcTTTTTTHHHHHHHHHHHHHTTccTTcccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHH#HccccHHHHHHHHHHHHHHHHHHHcTTcH####################HHHHHHHHHHTc###ccHHHHHHHHHHHHHHHHHHHHHHcccccccccTTTccccccccccccGGGHHHHHHHHHHHHHHHHHHHHTTTTc##TTcccccccccc#ccc##ccccccHHHHHTccccccccccccHHHHHHHHHHHHHHHHHHHHTTcTTcccccHHHHHHcccccccccccccTTHHHHHHHTcTTTTHHHHHHHHHHHHHHHHHccTTcHHHHHHHHHHHHHHHHHHHHH############## DISOP:02AL 479-480| PSIPRED cccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHcccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccEEcccccccccccHHHHHHHHHHcccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccccHHHHHHcccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccEEcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //