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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02989
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  187/199 : Viruses  1/175   --->[See Alignment]
a.157.1d.42.1
:165 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   7->161 2assA PDBj 2e-52 66.2 %
:RPS:PDB   7->161 2assA PDBj 2e-38 66.2 %
:RPS:SCOP  9->113 1lm8C  d.42.1.1 * 1e-26 28.2 %
:RPS:SCOP  87->161 1fqvB1  a.157.1.1 * 3e-35 77.3 %
:HMM:SCOP  7->72 1nexA2 d.42.1.1 * 8.4e-20 51.5 %
:HMM:SCOP  87->162 1fqvB1 a.157.1.1 * 1.1e-30 61.8 %
:RPS:PFM   9->67 PF03931 * Skp1_POZ 4e-13 59.3 %
:RPS:PFM   89->163 PF01466 * Skp1 1e-26 77.3 %
:HMM:PFM   87->163 PF01466 * Skp1 3.2e-42 70.1 77/78  
:HMM:PFM   8->68 PF03931 * Skp1_POZ 1.1e-26 59.0 61/64  
:BLT:SWISS 7->165 SKP1_SCHPO 7e-66 72.3 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02992 GT:GENE CIRG_02989 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 165 SQ:AASEQ MSSTATSKITLTSSDGVEMSMERQVAERSVLIKNMLEDLGDSGEPIPIPNVNESVLRKVVEWCEHHKNDPPSTGDDDNDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEDR BL:SWS:NREP 1 BL:SWS:REP 7->165|SKP1_SCHPO|7e-66|72.3|159/161| BL:PDB:NREP 1 BL:PDB:REP 7->161|2assA|2e-52|66.2|142/143| RP:PDB:NREP 1 RP:PDB:REP 7->161|2assA|2e-38|66.2|142/143| RP:PFM:NREP 2 RP:PFM:REP 9->67|PF03931|4e-13|59.3|59/64|Skp1_POZ| RP:PFM:REP 89->163|PF01466|1e-26|77.3|75/76|Skp1| HM:PFM:NREP 2 HM:PFM:REP 87->163|PF01466|3.2e-42|70.1|77/78|Skp1| HM:PFM:REP 8->68|PF03931|1.1e-26|59.0|61/64|Skp1_POZ| GO:PFM:NREP 2 GO:PFM GO:0006511|"GO:ubiquitin-dependent protein catabolic process"|PF03931|IPR016073| GO:PFM GO:0006511|"GO:ubiquitin-dependent protein catabolic process"|PF01466|IPR016072| RP:SCP:NREP 2 RP:SCP:REP 9->113|1lm8C|1e-26|28.2|85/88|d.42.1.1| RP:SCP:REP 87->161|1fqvB1|3e-35|77.3|75/76|a.157.1.1| HM:SCP:REP 7->72|1nexA2|8.4e-20|51.5|66/72|d.42.1.1|1/1|POZ domain| HM:SCP:REP 87->162|1fqvB1|1.1e-30|61.8|76/76|a.157.1.1|1/1|Skp1 dimerisation domain-like| OP:NHOMO 396 OP:NHOMOORG 188 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 11-1311-311-23211121111121111111111111111111112111111111112211111111-1111111111111111111-12112111111111122-2122121111112312121-212C3-12213351111-11E441113-1111121111--D143GK121111E111138B6E1L33432221 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 152 STR:RPRED 92.1 SQ:SECSTR ######cEEEEEcTTccEEEEEHHHHTTcHHHHHHHHccccccccEEcTTccHHHHHHHHHHHHHccccccH##ccc####cccccccHHHHHHTcccHHHHHHHHHHHHHHTcHHHHHHHHHHHHHTTTTccHHHHHHHTTcccccccTTHHHHHTTTTTHcc# PSIPRED cccccccEEEEEEccccEEEEcHHHHHHHHHHHHHHHccccccccEEcccccHHHHHHHHHHHHHHccccccccccHHccccccccccHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHHHHHHHHcccccc //