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Clostridium perfringens str. 13 (cper0)
Gene : CPE0058
DDBJ      :CPE0058      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  97/915 : Eukaryota  27/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:388 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  4->183 1pw4A  f.38.1.1 * 2e-06 15.7 %
:HMM:SCOP  1->385 1pw4A_ f.38.1.1 * 3e-59 22.0 %
:RPS:PFM   32->270 PF07690 * MFS_1 1e-12 23.1 %
:HMM:PFM   14->291 PF07690 * MFS_1 2.1e-29 21.3 277/353  
:HMM:PFM   277->381 PF07690 * MFS_1 3.7e-08 28.6 105/353  
:BLT:SWISS 36->270 MUCK_ACIAD 7e-14 21.8 %
:BLT:SWISS 296->361 Y736_HAEIN 6e-04 33.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB79764.1 GT:GENE CPE0058 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 69399..70565 GB:FROM 69399 GB:TO 70565 GB:DIRECTION + GB:GENE CPE0058 GB:PRODUCT conserved hypothetical protein GB:NOTE 388 aa, similar to pir:S66834 probable membrane protein YOL137w from yeast (Saccharomyces cerevisiae) (497 aa); 25.2% identity in 262 aa overlap. Putative N-terminal signal sequence and 10 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB79764.1 LENGTH 388 SQ:AASEQ MNSKKQNYVALAFLFIMMILAAIVENTKGIFIPVFKQEFGVNDNTISNLLISTSAAYMVLTFIGGMLCEKFGQKKVFLAGLMVIFLSLIFLSFTKNYLMLYTGMVISSAGIAMVAISCNTVLPILALTAQNVIMNVMHACYGLGSSVGQGLFGSLTARGVNWRTMYFFVGLVYLAVFICFIFVKIPRTEIVKEKDKMTIIEALSNKVIVAYMLALGLYVFTEQGISNWFVNYMKYGYNINEQKAGMYLSLFFAIFTIGRLFGGFVVEKRGYFNILYKTLIIGAALCILGLLLGRNGMVIISVSGLFFSITFPTTVLTISKVFDKNVAYITGIVITSASLVGMILNKAIGLLNESVGPDKAFYIIPASAILSAILMFYLYLNTKKRLVK GT:EXON 1|1-388:0| BL:SWS:NREP 2 BL:SWS:REP 36->270|MUCK_ACIAD|7e-14|21.8|234/413| BL:SWS:REP 296->361|Y736_HAEIN|6e-04|33.3|63/508| TM:NTM 12 TM:REGION 10->32| TM:REGION 46->68| TM:REGION 76->96| TM:REGION 108->130| TM:REGION 137->159| TM:REGION 165->187| TM:REGION 203->225| TM:REGION 246->267| TM:REGION 273->295| TM:REGION 300->322| TM:REGION 329->351| TM:REGION 359->381| SEG 279->293|liigaalcilglllg| SEG 363->374|iipasailsail| RP:PFM:NREP 1 RP:PFM:REP 32->270|PF07690|1e-12|23.1|238/347|MFS_1| HM:PFM:NREP 2 HM:PFM:REP 14->291|PF07690|2.1e-29|21.3|277/353|MFS_1| HM:PFM:REP 277->381|PF07690|3.7e-08|28.6|105/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 4->183|1pw4A|2e-06|15.7|178/434|f.38.1.1| HM:SCP:REP 1->385|1pw4A_|3e-59|22.0|381/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 155 OP:NHOMOORG 124 OP:PATTERN -------------------------------------------------------------------- -11---------------------------------------------------------------------------------------1--2-------2--1-1--2---------------------------11-----2---1-------------------------------------------11-----------------11------------------14---------------211------------------------------------1------------------------------------112-1111111-1---1111111-1-----------------11-1------111-------------------------111-----------------------------1------------------------------------------------------------------------------------------------------------------------1----------------------------1-1--------------------------------------------1--1-2--21111-11111---1---1------------------------------------------------------------------------------11--------------------22111------------------------111-1-1-1--------------------112--1-31-111-------1--------------------1--------------1----------------------------131--------- -----1-----------31212--------------------------222222-1-1-----11----11---1---------11----1--1---------122-----------------------------------------------------------------------------------2--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 385-388| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc //