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Clostridium perfringens str. 13 (cper0)
Gene : CPE0161
DDBJ      :CPE0161      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:488 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   344->486 2dzcA PDBj 4e-04 26.3 %
:RPS:PDB   113->464 1ddqC PDBj 6e-05 4.9 %
:HMM:PFM   11->58 PF05043 * Mga 4.2e-06 27.7 47/87  
:HMM:PFM   80->164 PF05043 * Mga 1.8e-23 41.0 83/87  
:BLT:SWISS 232->441 REFR_VACCW 4e-05 26.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB79867.1 GT:GENE CPE0161 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(205272..206738) GB:FROM 205272 GB:TO 206738 GB:DIRECTION - GB:GENE CPE0161 GB:PRODUCT hypothetical protein GB:NOTE 488 aa, no significant homology. GB:PROTEIN_ID BAB79867.1 LENGTH 488 SQ:AASEQ MFKEDLLETSEKIQYNIFKKVYVNNGKINKNDLCSDLNISLPTLKTHLKKIEYLLNKYYKSKVKISSSKDFIFLKYETGVSLHSLTTYYIESSLKYKLLKFFFIKHTKKFTGIQICNYFNISLATLNRKILECNSLLKEFDISIKNYELTGSQLQISYFYYLLFWNNRIDISSVVSANHNITEVIEKTFNITLKISEKYPLYTWLKILMIRKKFFVEDFFKDEFTKKNLSILENTEIFIELKNFFEKDSLSKSSSTYLAYSTLCFILSFNIIPYEVIKEFSTVNESTPFKIFSLMTEEMSNLYTTHPNNFNNEVKLHLLSLCFKSYFFKGIFYSNNKIVTNYYLNEFTSDSREKFVNDLLLKINSLYKVKYSFDPYYFKLCIILTLNYLNGVSKHSLTIGILSRIDSLILNTTIDYLRKFLRRKFDVIVEVYDEYKKENYDLVITNFDPKYIPKNYNNIYIFSNLAVQYDLGNIVKILNEIEKIKFEG GT:EXON 1|1-488:0| BL:SWS:NREP 1 BL:SWS:REP 232->441|REFR_VACCW|4e-05|26.9|193/551| TM:NTM 1 TM:REGION 256->278| SEG 57->69|kyykskvkisssk| SEG 94->111|lkykllkfffikhtkkft| SEG 212->227|kkffvedffkdeftkk| BL:PDB:NREP 1 BL:PDB:REP 344->486|2dzcA|4e-04|26.3|137/222| RP:PDB:NREP 1 RP:PDB:REP 113->464|1ddqC|6e-05|4.9|349/1112| HM:PFM:NREP 2 HM:PFM:REP 11->58|PF05043|4.2e-06|27.7|47/87|Mga| HM:PFM:REP 80->164|PF05043|1.8e-23|41.0|83/87|Mga| OP:NHOMO 6 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------1-----1------------------------------------------------------------12------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 371 STR:RPRED 76.0 SQ:SECSTR ################################################################################################################ccccccTTcccGGGTTHHHHHcccccccTTccccEEccccccEEccccccTTHHHHTTccccccEEcccccEEccccccccccccccccccccccccccTTcccccccccccccccccccccTTTTcccEEEccccTTccccEEEcccccccccEEcccccccHHHHHHHHccccccccccccccccccTTTcTTTTTcccHHHHHH###HHHHHccTTcccccccccTTTTTcccccccGGGcccccTTTGGGGTccccccccccccccccccccHHHHHHHHHTTcccccccccccTTTccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccTTTccTTcccccccTEEEEcTTccEEEEcTTcccEEE## PSIPRED ccHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEcccccHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHccEEEEccEEEEcHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccEEEHHHccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccccEEEEcccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHcc //