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Clostridium perfringens str. 13 (cper0)
Gene : CPE0270
DDBJ      :CPE0270      probable ABC transporter
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:390 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   39->235 2yz2B PDBj 6e-21 32.5 %
:RPS:PDB   1->63 3dmdA PDBj 2e-04 15.9 %
:RPS:PDB   39->247 2dwpA PDBj 5e-35 7.8 %
:RPS:SCOP  5->227 1b0uA  c.37.1.12 * 5e-35 27.1 %
:HMM:SCOP  29->226 1ii8.1 c.37.1.12 * 2.1e-51 37.2 %
:RPS:PFM   64->170 PF00005 * ABC_tran 6e-10 36.4 %
:HMM:PFM   64->170 PF00005 * ABC_tran 4.2e-12 34.3 102/118  
:HMM:PFM   41->74 PF03193 * DUF258 0.00011 21.2 33/161  
:BLT:SWISS 1->254 TAGH_BACCZ 8e-68 48.6 %
:PROS 145->159|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB79976.1 GT:GENE CPE0270 GT:PRODUCT probable ABC transporter GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 347818..348990 GB:FROM 347818 GB:TO 348990 GB:DIRECTION + GB:GENE CPE0270 GB:PRODUCT probable ABC transporter GB:NOTE 390 aa, similar to gp:AB030032_11 putative ABC transporter from Actinobacillus actinomycetemcomitans (398 aa); 43.7% identity in 387 aa overlap ATP-binding protein GB:PROTEIN_ID BAB79976.1 LENGTH 390 SQ:AASEQ MSVAIRVKDLTKKYKLYQKRSERLANAFGKEKNIKEFYALKGVSFEISKGECVGIIGHNGAGKSTLLKLLTGVAFPTSGEIEINGRLASMLELGSGFNPELTGMENIYFNGSLNGLTKEEIDGKLKDILEFADIGNFIEQPVKNYSSGMFARLAFAVAINVDPDILIVDEILSVGDVGFQVKCMEKFNEFKKKGKTILYVSHGLGTVKKFCDRAIWLQKGEVVDDGNSVIVVERYYNLNFNPANIEQLKDHKSDIINSIAVKSNTKNVEYLEKLDLEVEYDLISNDLKDPNIVLEFRKTDYEPGTTRGNDQFVCGINSKDNIKNIPFNLGVNKLKVSLNKVNLVAGVYYIDFVLRDGEEEVYRKINGYSFTLNDKYRGEGFLILGHSWGN GT:EXON 1|1-390:0| BL:SWS:NREP 1 BL:SWS:REP 1->254|TAGH_BACCZ|8e-68|48.6|253/549| PROS 145->159|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 39->235|2yz2B|6e-21|32.5|197/263| RP:PDB:NREP 2 RP:PDB:REP 1->63|3dmdA|2e-04|15.9|63/310| RP:PDB:REP 39->247|2dwpA|5e-35|7.8|205/431| RP:PFM:NREP 1 RP:PFM:REP 64->170|PF00005|6e-10|36.4|107/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 64->170|PF00005|4.2e-12|34.3|102/118|ABC_tran| HM:PFM:REP 41->74|PF03193|0.00011|21.2|33/161|DUF258| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 5->227|1b0uA|5e-35|27.1|203/258|c.37.1.12| HM:SCP:REP 29->226|1ii8.1|2.1e-51|37.2|196/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 32590 OP:NHOMOORG 1168 OP:PATTERN LLF6LBDEMMMLLIQFeDMIIHBVdEHTaORKGADAC9ECFDAPXFTZFPynZ7QdOPWLNGIBR148 IMfE*QROVVYHNIJFIDD-DJ66MoDDDDDEUUTVXsooLXDgQhaONSQEgggGHN99VZYOfZbwntONNMMaNJQBeOa86989LLKI2I67C-1DEQIJGOHPHQ56667665778888ENKFKSHGHJSGXcdjkDDDkLUVcdWWVPRKLGAHAFBRTNUkmjPCH8FBCCHDF9BPHJIGhY8Jdr********t********wwoz***bim*ybfprrnmo**TeffefdaeeffedeVZUVSoXMShgQHRPXhfKKmmTOINUUbegcZdieamjmlefeeacfjdegSQSRQSTUUSSQQldeYXahfidh*m*********f*eh*uuVefe*gasjtWhQA**ieVUfdMUiaiiIUVHFPLJJGHEDDDPE***ICUlkiraqsrrtlvmnp*-ORqPMrTb**H7*************yAAFhi*acchtorGFGGGGGGTLOFFXOg33344444554545885464454466464DBBB89c*xdvmprqsoeaYZUkk**eaabQiul*ellb6HbcQgLSPRdbwo**FML9HEGRHCBDCCCBHGGKNOXfyFPIURFNhKJXBRUTJPSXISPRMPZeOiCAGNADCCEBB766866766AF9ADDCUVhFRKMDIDbHGIIIDKSGFGIHIROJOQ3-5CFDF11-111nZymLiafiifgigiff-ifefjchgigjjhddeeeev*yzzSTPYXVYWXXYYWWXXXYUlYVVaaZeE1dhjjnkjhhmnm-2AABCABCGGGGIAlRxNNNRPPAEHEELIMNJJIHJBJ8CCROXWUVRlqtZZYQWOwqvD9988A989FQYbkVWWWWijjefIGFCEDCDEFA99953FLHGFHFH78766766*7N99778-8877BB4BBB87I767336VckQThuhhf9PE 1111NK9-D91AJUC83999ADBDADBAA6769IGC8B89688333D7DC98DA9BB38665644213-56137424-22-2144213-565365343447266A9-65CREGGOHWCAE7CJGcf7i8**T3QIYEFB7Q9BfNCH8A9T97*DMKJUES*EQIH6kHM*SaKH84A7*57665NNMl7ZJ9DbOUP4 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 389-390| PSIPRED ccEEEEEEEEEEEEcccccccccEEEEEccEEEcccEEEEEcccEEEcccEEEEEEccccccHHHHHHHHHccccccccEEEEccEEEEEEEEcccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHcccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccEEEcccccEEEEEEEHHHHcccccEEEEEEEEEEEEccEEcccEEEEEEEEcccccEEEEEcccEEEEEEEEEcccccccEEEEEEEEEccccEEEEEccEEEEEEEcccccEEEEEccccccc //