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Clostridium perfringens str. 13 (cper0)
Gene : CPE0306
DDBJ      :CPE0306      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  33/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:532 amino acids
:PSIPRED
:DISOPRED
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80012.1 GT:GENE CPE0306 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 388423..390021 GB:FROM 388423 GB:TO 390021 GB:DIRECTION + GB:GENE CPE0306 GB:PRODUCT hypothetical protein GB:NOTE 532 aa, partially similar to gp:BSP250862_5 MrsE protein from Bacillus sp. HIL-Y85/54728 (244 aa); 27.9% identity in 183 aa overlap. 13 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80012.1 LENGTH 532 SQ:AASEQ MNRIKLLLKYFIGNSFNNASSNIKSRNLAIVMYILIIIGISTPIANMIDSMYPNFASIGQEGYLLSIIFLIGSLTLLVLGVYDILDSFFFSQDIEPLMPLPFKSGEIMIGKFITCLVDMYIYLSITIIPLISFGLNAKIGFSYFLMIIPVYLFAPIIIVIFCILITMILMSFINVSKYQNTFKIIFGTLGIVLILGVYSLNSTGLNSENVSVALRNKTALVDLTNKIFITTTFSVKALLYSNSLKGLLNLGLLIGISIVALIIAYFLGKSMYNKILSRNLNVYSERKNILENNKNKVVVRSSVRKAMVLRELRTILRDPSNFINCVVMIVYMPIFIFIFFIKGNILVNDTQLAKDTIIMAATFIVTALTISGNSVASTALSREGKEILISKYIPVDYKVQIQSKLIVSFIVNGLALILGIAILIYLKASPLVIVMSLLVQMGTIATISLVGMILDYLSPKLEWTDTKNLYSKNFKPLLVMLICLVIGGFNIGLIVTKSPLIVFLIDMSILLIVSLVLYKILMKKGLEVYKRL GT:EXON 1|1-532:0| TM:NTM 12 TM:REGION 27->49| TM:REGION 63->85| TM:REGION 109->131| TM:REGION 146->168| TM:REGION 181->202| TM:REGION 247->269| TM:REGION 316->338| TM:REGION 353->375| TM:REGION 401->423| TM:REGION 434->456| TM:REGION 472->494| TM:REGION 501->522| SEG 238->258|llysnslkgllnlglligisi| SEG 292->305|nnknkvvvrssvrk| SEG 334->341|ifififfi| SEG 413->424|glalilgiaili| OP:NHOMO 33 OP:NHOMOORG 33 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111-111111------111----1-----------------------------------------------------------------------------------------------------1111------------11-111-1---1---------1------1-1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 200-213, 278-301| PSIPRED cHHHHHHHHHHHHHcHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEHHccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccEEEEccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //