[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Clostridium perfringens str. 13 (cper0)
Gene : CPE0331
DDBJ      :CPE0331      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  44/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:224 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   147->218 PF06161 * DUF975 4e-14 47.2 %
:HMM:PFM   1->220 PF06161 * DUF975 9.2e-65 37.4 219/243  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80037.1 GT:GENE CPE0331 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 417022..417696 GB:FROM 417022 GB:TO 417696 GB:DIRECTION + GB:GENE CPE0331 GB:PRODUCT hypothetical protein GB:NOTE 224 aa, partially similar to pir:S32215 hypothetical protein 1 from Bacillus megaterium (226 aa); 54.4% identity in 57 aa overlap. 5 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80037.1 LENGTH 224 SQ:AASEQ MTDRVECKLKAKELLRGRWENAVGACLLFFVSTFLLSFLLSPIPVFGWIIIALISTFLTGSFIKYCIKLNETEGKVKYLECLISFKTTLKILVCDILIGLVVGIGWIIFTMIFSVAFIASQSIVVIIVVLIILVALGFFIEAILFPVPMILTEDEGVGVMEAIEMSFNITKGYRWKYIVMNLSFIGWMILSFLTFGIGMLWLQPYMMLTYYLFYKGIRSANTTI GT:EXON 1|1-224:0| TM:NTM 4 TM:REGION 31->53| TM:REGION 85->107| TM:REGION 126->148| TM:REGION 178->200| SEG 27->41|llffvstfllsflls| SEG 91->108|ilvcdiliglvvgigwii| SEG 114->140|svafiasqsivviivvliilvalgffi| RP:PFM:NREP 1 RP:PFM:REP 147->218|PF06161|4e-14|47.2|72/214|DUF975| HM:PFM:NREP 1 HM:PFM:REP 1->220|PF06161|9.2e-65|37.4|219/243|DUF975| OP:NHOMO 48 OP:NHOMOORG 44 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-111111111------111-----1--------2-------------------------------11--11-1---------------11---------------------------------1--1-21111111-1--1---122--1---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7, 223-224| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //