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Clostridium perfringens str. 13 (cper0)
Gene : CPE0357
DDBJ      :CPE0357      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:184 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   59->143 1mkyA PDBj 7e-04 34.1 %
:HMM:PFM   72->153 PF11068 * DUF2869 5e-06 17.1 82/131  
:BLT:SWISS 94->181 MYSC_CHICK 4e-05 25.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80063.1 GT:GENE CPE0357 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 454367..454921 GB:FROM 454367 GB:TO 454921 GB:DIRECTION + GB:GENE CPE0357 GB:PRODUCT hypothetical protein GB:NOTE 184 aa, similar to C-terminal of prf:1711414A USO1 gene from Saccharomyces cerevisiae (1790 aa); 29.7% identity in 148 aa overlap. Putative N-terminal signal sequence was found by PSORT GB:PROTEIN_ID BAB80063.1 LENGTH 184 SQ:AASEQ MARNFKKTIWLLVGVMIFGIIGMVGCTKKTNEMTENSGLSATTPAEYKTMLEEKIKTYIGDVNLGTEYDFSKVTEDTKQATYEEYEKYYKNLDTELINLKNELNSKVSPSDGKVNDANRKIVESIDNLKMSISTVKSDLDANRNKILAMPKDEFIGAMKDIEKSAYDARVKVQESIDAAKNSFK GT:EXON 1|1-184:0| BL:SWS:NREP 1 BL:SWS:REP 94->181|MYSC_CHICK|4e-05|25.0|88/1102| TM:NTM 1 TM:REGION 8->27| SEG 13->25|vgvmifgiigmvg| BL:PDB:NREP 1 BL:PDB:REP 59->143|1mkyA|7e-04|34.1|85/400| HM:PFM:NREP 1 HM:PFM:REP 72->153|PF11068|5e-06|17.1|82/131|DUF2869| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 85 STR:RPRED 46.2 SQ:SECSTR ##########################################################EccTTccHHHHHHHHHccccEEEEEETTEEEEEEEcGcccHHHHHHHHHTTccEEEEETTTcccHHHHHHHHHHHTccEEEEEEc######################################### DISOP:02AL 1-4, 104-115, 180-184| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //