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Clostridium perfringens str. 13 (cper0)
Gene : CPE0358
DDBJ      :CPE0358      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  12/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:414 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   68->414 1ddqC PDBj 6e-05 6.8 %
:BLT:SWISS 61->237 G13B_DICDI 7e-04 26.1 %
:BLT:SWISS 187->372 Y147_TNAVC 1e-04 25.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80064.1 GT:GENE CPE0358 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(455050..456294) GB:FROM 455050 GB:TO 456294 GB:DIRECTION - GB:GENE CPE0358 GB:PRODUCT hypothetical protein GB:NOTE 414 aa, no significant homology. 1 putative transmembrane region was found by PSORT GB:PROTEIN_ID BAB80064.1 LENGTH 414 SQ:AASEQ MIDDFDRKLFEMARESKVKEPNALKYKVDYTFKKLKKNKFNFRHLGSIAAILIFCILSVGIYFPTYAMNIPILGDVVEILSNKFNLSGYEINAQNLNYQVSNEDYTLTIESAYYNGLETTFFFKIKGNAKLNKSGQYFFEANFKYNEDISYEGGLEKGEFIDDYTFAGMMTFYINPYSESKLPEKFNIKFSIPNIIADSEILAVNSDTLNLSFDITDLNVKETKINKEIQANENSILISSIKKYPTSIVIDYDEKFNNPENKLSFILWHETLGQINYLLPSTPGKLFIVPKTRSKLNVDNLIKESMPLSIGETKTFGKVGKVSIENIETKDGKTYISIRKTGDINSYDFNIIKKENINSKLNMYEYETKVIGILDTLTTYVIPDFTSDIDYLLEYEYISNDDIEILYDQIIEIN GT:EXON 1|1-414:0| BL:SWS:NREP 2 BL:SWS:REP 61->237|G13B_DICDI|7e-04|26.1|161/100| BL:SWS:REP 187->372|Y147_TNAVC|1e-04|25.7|175/1481| TM:NTM 1 TM:REGION 42->64| SEG 32->42|fkklkknkfnf| RP:PDB:NREP 1 RP:PDB:REP 68->414|1ddqC|6e-05|6.8|336/1112| OP:NHOMO 13 OP:NHOMOORG 12 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111-1------21--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 336 STR:RPRED 81.2 SQ:SECSTR ###################################################################cccTTGGGGcTHHHHHHccccccTTcccGGGTTHHHHHcccccccTTccccEEccccccEEccccccTTHHHHTTccccccEEcccccEEccccccccccccccccccccccccccTTcccccccccccccccccccccTTTTcccEEEccccTTccccEEEcccccccccEEcccccccHHHHHHHHcccccccc###########ccccccccccTTTcTTTTTcccHHHHHHHHHHHccTTcccccccccTTTTTcccccccGGGcccccTTTGGGGTccccccccccccccccccccHHHHHHHHHTTcccccccccccTTTccccccccHHHHHHHHHHHHH DISOP:02AL 16-28, 150-157| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHccHHHHHccccEEEEEEEEEEcccccccHHHHHHHHcEEEEEcccEEEEEEEEEcccEEEEEEEEEEccccccccccccccHHccccccccccccccEEEEcccEEEEEEEEEccccccccccEEEEEEEEEcccccccccEEEcccEEEEEEEEcccEEEEEEEccEEcccccEEEEEEEEEcccEEEEEEcccEEccccEEEEEEEEcccccccccccccccEEEEEEEEcccccccHHHHccccEEEccccccccEEEEEEEEEccccccEEEEEEEccccccEEEEEEEEccccccEEEEEEEEEEEEHHHHHHHHcccccccccEEEEEEEEccccccEEEEEEEEEcc //