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Clostridium perfringens str. 13 (cper0)
Gene : CPE0403
DDBJ      :CPE0403      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:178 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   64->126 PF07006 * DUF1310 1.6e-05 24.2 62/122  
:HMM:PFM   15->84 PF03706 * UPF0104 0.00054 18.8 69/294  
:BLT:SWISS 3->141 Y539_AQUAE 4e-04 28.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80109.1 GT:GENE CPE0403 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 517036..517572 GB:FROM 517036 GB:TO 517572 GB:DIRECTION + GB:GENE CPE0403 GB:PRODUCT hypothetical protein GB:NOTE 178 aa, no significant homology. 2 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80109.1 LENGTH 178 SQ:AASEQ MSDKKLFTIKTSINKKDYSRFLYIATFLRKKFTIPAIIVITALMAGFVSYNNRIFELKSFLIYWLILLIITLFAIVVKIEFQSREREKADKAGVLKSIETLEFFDDILVIKSTAFKGKSKIKYYKFYEVIETKNYFIIYFNRRQASIIRKIDLEDSLVDELRNLLTGKIGHKYKKLFK GT:EXON 1|1-178:0| BL:SWS:NREP 1 BL:SWS:REP 3->141|Y539_AQUAE|4e-04|28.5|130/100| TM:NTM 2 TM:REGION 32->54| TM:REGION 57->79| SEG 61->72|liywlilliitl| HM:PFM:NREP 2 HM:PFM:REP 64->126|PF07006|1.6e-05|24.2|62/122|DUF1310| HM:PFM:REP 15->84|PF03706|0.00054|18.8|69/294|UPF0104| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3| PSIPRED ccccEEEEEEEcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHccEEEEEEccccccccEEHHHHHHHHccccEEEEEEEccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcc //