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Clostridium perfringens str. 13 (cper0)
Gene : CPE0422
DDBJ      :CPE0422      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  81/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:428 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  7->404 1pw4A  f.38.1.1 * 6e-11 13.1 %
:HMM:SCOP  1->420 1pw4A_ f.38.1.1 * 3.3e-48 20.9 %
:HMM:PFM   35->361 PF07690 * MFS_1 1.1e-28 17.1 310/353  
:HMM:PFM   371->420 PF07690 * MFS_1 0.00064 25.5 47/353  
:BLT:SWISS 7->414 YIHN_ECOLI 2e-71 36.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80128.1 GT:GENE CPE0422 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 540117..541403 GB:FROM 540117 GB:TO 541403 GB:DIRECTION + GB:GENE CPE0422 GB:PRODUCT conserved hypothetical protein GB:NOTE 428 aa, similar to sp:YIHN_ECOLI HYPOTHETICAL 46.3 KDA PROTEIN IN GLNA-RBN INTERGENIC REGION (O421) from Escherichia coli (421 aa); 37.5% identity in 408 aa overlap GB:PROTEIN_ID BAB80128.1 LENGTH 428 SQ:AASEQ MKNNNAKKWITLLVLCAGGGIIYRLPYLREVFYIPMQQAFHLTNFQMGFLTSMYGIVNFLLYIPGGVIADKFSYKILVPFSLIATGLLGFWYATIPSYTVCLIINGAWAITTVFTFWPTMVKAVRMLGDSSEQGKLFGILEGGRGAASTVVSFIALGMLAKLGEGLLGIRSIIIFYSVALIVIGIIAYFLLDDSKEEKEINKQTRGDIVHGIKKVVKMPEVWLVAALVFTTYAAFSGLAFLTPYVTEIFGMSVALGAFIGIIRSYVIMMLAPPISGVIADKMHSTIKFMIIGLTLSIIFTLVYVFMPGKSAFIIPVLINMLILSIILLGMKGVFFAPLDEVRVPREYTGIAAGIVSFIGYVPDMFINSYYGGLLDSHPGIKGYNLIFLSMIALCVIGLICGIVLYKLVYSKKKESVGEKELEVAKLNS GT:EXON 1|1-428:0| BL:SWS:NREP 1 BL:SWS:REP 7->414|YIHN_ECOLI|2e-71|36.3|408/421| TM:NTM 12 TM:REGION 9->31| TM:REGION 48->70| TM:REGION 73->95| TM:REGION 99->121| TM:REGION 142->164| TM:REGION 170->192| TM:REGION 215->237| TM:REGION 251->273| TM:REGION 284->306| TM:REGION 315->337| TM:REGION 345->367| TM:REGION 382->404| SEG 317->328|linmlilsiill| HM:PFM:NREP 2 HM:PFM:REP 35->361|PF07690|1.1e-28|17.1|310/353|MFS_1| HM:PFM:REP 371->420|PF07690|0.00064|25.5|47/353|MFS_1| RP:SCP:NREP 1 RP:SCP:REP 7->404|1pw4A|6e-11|13.1|389/434|f.38.1.1| HM:SCP:REP 1->420|1pw4A_|3.3e-48|20.9|406/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 114 OP:NHOMOORG 82 OP:PATTERN -----------------------1-------------------------------------------- -------1-------------------------------------------------------1----------------1-----------------------1--------------------------------------------------------------------------------------------------------------------1---------1----------------1------------------------------------------------------------------------------------------2---11--1----------------------1---------------------------------------------------------------------------------------------------------------------------------------------------1-------1---------------------1-------------------------------------------------------------2-1-------------------------1----------------------------------1------2222222222-222231121221222222--------1---2-------1-12-2---1111---111-1121---------------------------------11------------------------------1---------1111-----------------------------------------------------11--1111-1112----------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 128-131, 193-208, 410-421, 427-428| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccc //