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Clostridium perfringens str. 13 (cper0)
Gene : CPE0431
DDBJ      :CPE0431      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  50/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.159.1f.1.2
:280 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   67->171 3c8gD PDBj 5e-04 14.3 %
:RPS:SCOP  48->84 2hy1A1  d.159.1.11 * 1e-04 32.4 %
:RPS:SCOP  61->205 1ddtA3  f.1.2.1 * 2e-09 7.0 %
:HMM:PFM   27->88 PF06925 * MGDG_synth 0.00019 17.9 56/169  
:BLT:SWISS 16->280 Y846_CAMJE 4e-05 20.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80137.1 GT:GENE CPE0431 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 551453..552295 GB:FROM 551453 GB:TO 552295 GB:DIRECTION + GB:GENE CPE0431 GB:PRODUCT hypothetical protein GB:NOTE 280 aa, no significant homology. Putative N-terminal signal sequence was found by PSORT GB:PROTEIN_ID BAB80137.1 LENGTH 280 SQ:AASEQ MNEISDLVKITSILGIAATTYLVYENNSIFINEYELFTRKTPNSFRGFKILHLNNLYGKTFGSENYRLIEKINSLKPDIIVTTGNMLTSSLDKDFVFLELCKNLRSFYPIYYSIEGCKNLSGKKYEKYRDYLKGLVDIGVILLNNSKVSLIKKEDKLNIYGIYIEDEIKSFSFKGGCKKENIFSKEDLVNKLGSPNRSEFNIVLANDVINFEAYVKWGSDITFSGYTRAINRYIFNNLMERKKGIFIEKDSSMILSRGLGNDFFKMRIMNRPEITLITIR GT:EXON 1|1-280:0| BL:SWS:NREP 1 BL:SWS:REP 16->280|Y846_CAMJE|4e-05|20.8|245/374| RP:PDB:NREP 1 RP:PDB:REP 67->171|3c8gD|5e-04|14.3|98/153| HM:PFM:NREP 1 HM:PFM:REP 27->88|PF06925|0.00019|17.9|56/169|MGDG_synth| RP:SCP:NREP 2 RP:SCP:REP 48->84|2hy1A1|1e-04|32.4|37/227|d.159.1.11| RP:SCP:REP 61->205|1ddtA3|2e-09|7.0|142/181|f.1.2.1| OP:NHOMO 60 OP:NHOMOORG 50 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------11--------------------------------------------------------------------------------------------------------11111121-121112------111---111-211122---------------------------------------------------------------------------------------------1111-------1-1-111-222111----2--11----------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1----------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 97 STR:RPRED 34.6 SQ:SECSTR ##################################################################HHHHHHHTTGGGGcccccHHHHHHTHHHHcTTcTTccHHHHHHHHH#######HTTcHHHHHHHHHHHHHHHHHTcccccTTcHHHHHHHTTcHHHHHHHHHHH############################################################################################################## PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccEEEEEEEccccccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHHHHHHcccEEccccEEEEEEcccEEEEEEEcccccccccccccccccccccccccHHHHHccccccccEEEEEccccHHHHHHHccccEEEEccccccccccccccccccccEEEEccEEEEEEcccccccccEEEccccEEEEEEEc //