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Clostridium perfringens str. 13 (cper0)
Gene : CPE0433
DDBJ      :CPE0433      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  52/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:431 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   201->217 PF07656 * KWG 8.2e-05 23.5 17/17  
:HMM:PFM   182->202 PF09053 * CagZ 0.00076 52.4 21/199  
:BLT:SWISS 10->245 IF2_HELPJ 4e-04 26.8 %
:BLT:SWISS 290->399 MAP4_BOVIN 7e-04 25.9 %
:REPEAT 4|71->116|169->238|239->313|351->428

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80139.1 GT:GENE CPE0433 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 553503..554798 GB:FROM 553503 GB:TO 554798 GB:DIRECTION + GB:GENE CPE0433 GB:PRODUCT hypothetical protein GB:NOTE 431 aa, partially similar to sp:Y164_METJA HYPOTHETICAL PROTEIN MJ0164 from Methanococcus jannaschii (395 aa); 29.5% identity in 234 aa overlap GB:PROTEIN_ID BAB80139.1 LENGTH 431 SQ:AASEQ MRLKNICFMAMATILCTSVLTGCGTSSAKEDSDNELYIITEDKSSISLSNSKPGMFGVTEDGEIFMEKGYEGKVAYIDKKGKKSIGFKFDKGSEFSYGMAGVKEGNTYKIINQKGKTLVEKEDGVLSPLNNNLIRYEKLANEILTNENTTEAIESLTQSGKTLKTTGILNTKGEIIVEPGRYDEIIKDIGEGYILVKKNKMYGLLNAEGNEIIPCEYTSIGEINEGFIPVSKGNLCGALNEKGEIIVPIEYFYVGSMNEGVAPARLDESGIGFLNKEGSWAIMPDFDGVTSMNNGVAFARKDNKHIIIDKDGKEVETKINFENKVSINGFSDSGLAVVDILDGESKYMSVINTKGEEIKNLEKKDYSALEVYPSGLIVSVNQEGKKGLLKEDGSVILEEEYNDIRVISKDVILVDKDGTYSYIDSTGKTLY GT:EXON 1|1-431:0| BL:SWS:NREP 2 BL:SWS:REP 10->245|IF2_HELPJ|4e-04|26.8|224/949| BL:SWS:REP 290->399|MAP4_BOVIN|7e-04|25.9|108/100| NREPEAT 1 REPEAT 4|71->116|169->238|239->313|351->428| HM:PFM:NREP 2 HM:PFM:REP 201->217|PF07656|8.2e-05|23.5|17/17|KWG| HM:PFM:REP 182->202|PF09053|0.00076|52.4|21/199|CagZ| OP:NHOMO 78 OP:NHOMOORG 52 OP:PATTERN -------------------------------------------------------------------- -11----------------------------------------------------------------------------------------1-------2121--13-----------------------1---21----------1--1----------------111-1--------------------------------------1----------------------2------------------------------------------------------------------------------------------31---222222212---22111--11----1---------3-----2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2----------------11-------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------221122------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 9-14,17-18| PSIPRED ccccccHHHHHHHHHcccEEEccccccEEEEEcccEEEEcccccEEEEEEEEEEEEEEEcccHHHHHHcccccEEEEcccccEEEEEEEccEEcccccEEEEEEccEEEEEEccccEEEccccccccccccccEEEEEccccEEccccHHHHHHHHHcccEEccEEEEEEcccEEEEcccccccccccccccEEEEEEccEEEEEEccccEEEEEEEEEEccccccEEEEEEccEEEEEEccccEEEEEEEcccccHHccEEEEEEccccEEEEEccccEEEEEEEcccccccccEEEEEEccEEEEEcccccEEEEcccccccEEEcccccccEEEEEHHcccccEEEEEcccccEEEccccccccEEEEccccEEEEEEEccEEEEEEccccEEEccEEcccccccccEEEEEEccEEEEEEcccEEEc //