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Clostridium perfringens str. 13 (cper0)
Gene : CPE0477
DDBJ      :CPE0477      probable beta-glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  138/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:294 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->103 2z87B PDBj 7e-13 37.8 %
:RPS:PDB   3->261 3e25A PDBj 2e-16 14.3 %
:RPS:SCOP  1->130 1omxA  c.68.1.15 * 3e-15 11.5 %
:HMM:SCOP  4->249 1qg8A_ c.68.1.1 * 4e-30 23.0 %
:RPS:PFM   6->105 PF00535 * Glycos_transf_2 8e-13 32.3 %
:HMM:PFM   6->109 PF00535 * Glycos_transf_2 9.3e-29 31.4 102/169  
:BLT:SWISS 4->103 CHS_ECOLX 2e-12 37.8 %
:BLT:SWISS 186->274 YKP3_KLULA 3e-04 33.3 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80183.1 GT:GENE CPE0477 GT:PRODUCT probable beta-glycosyltransferase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 597023..597907 GB:FROM 597023 GB:TO 597907 GB:DIRECTION + GB:GENE CPE0477 GB:PRODUCT probable beta-glycosyltransferase GB:NOTE 294 aa, similar to pir:S51262 probable beta-glycosyltransferase trsC from Yersinia enterocolitica (292 aa); 33.3% identity in 258 aa overlap. 1 putative transmembrane region was found by PSORT GB:PROTEIN_ID BAB80183.1 LENGTH 294 SQ:AASEQ MEKLLTVFTPTYNRVHTLHKCYESLKNQSCKDFKWLIIDDGSTDGTKDVVKRWIHEKNDFEITYIYQSNKGMHGAHNTAYENIDTELNICIDSDDYMPRDAVEKINKNWNRVKHNKKISGLVGLDSYENGDVIGKKFPEGLKEATLFEINNKYKIPGDKKLVYRSELTKKFPYPIFEGEKYVGLAYKYYKLDEEHRLALINDILCVVEYLEDGSSKNMIKQYKNNPKGFAFYRIENIKNSKATLKFKFKESIHYVASSFISKNKNFLIESPEKILTLLSIPMGMLLYLYIKIKG GT:EXON 1|1-294:0| BL:SWS:NREP 2 BL:SWS:REP 4->103|CHS_ECOLX|2e-12|37.8|98/686| BL:SWS:REP 186->274|YKP3_KLULA|3e-04|33.3|78/594| TM:NTM 1 TM:REGION 270->291| BL:PDB:NREP 1 BL:PDB:REP 4->103|2z87B|7e-13|37.8|98/591| RP:PDB:NREP 1 RP:PDB:REP 3->261|3e25A|2e-16|14.3|245/270| RP:PFM:NREP 1 RP:PFM:REP 6->105|PF00535|8e-13|32.3|99/148|Glycos_transf_2| HM:PFM:NREP 1 HM:PFM:REP 6->109|PF00535|9.3e-29|31.4|102/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 1->130|1omxA|3e-15|11.5|122/250|c.68.1.15| HM:SCP:REP 4->249|1qg8A_|4e-30|23.0|239/255|c.68.1.1|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 200 OP:NHOMOORG 148 OP:PATTERN -------------------1------------41-1--------1---1---1-1-11---------- -----------------------------------------------------------------------21111--11---------321-1-----6-22-1-1--2--------------2------------------------211------------1--22-2---1-----1-------1----1-----11-1-2-111-1--111-2-1-----------1-1--------------2----1--1--2--1-----1--11---1322---------1--2--12-3--------------2221-2222-----1----1--11211---3--1-1-----------------------1-1--------------------------------------------------------------1--------11-----------------------------11----111-11-----------11111---------------------1------------------------------------------------1-12--1----111--1-1---1---1----1111121-----------1-1-------1-1-------1---1-------------------------1----------1--------1---1------------------1----------------------------------------------------1------------------------------------------------22222222--------------------------------1--------------1-------------------------------1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 92.9 SQ:SECSTR ccccEEEEEEEcccTTTHHHHHHTTGGGcTTccEEEEEEccccccHHHHHHHTTcEEEEHHHHcTTcccccHHHHHHHHHHHccccEEEEcccccccccTEETHHHHHcHHHHHccccccEEEEEcccHHHHTHHHHHHHHcGHHcGGGTTcccTTcccEEEEHHHHHHcccccGGGHHHHHHHHHHHHHHHHHHcTTcEEEEEccccccccHHHHHHHHHHHHHHHHHTTccccccccEEcEccccEEccccccccccHHccccccccccGG##################### PSIPRED ccccEEEEEEccccHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEEEEEEcccccccccccHHHHHHHHHHHccccccccccEEEEEHHHHHHccccccccccccHHHHHHHHHHHcccEEEEccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHEEEEccc //