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Clostridium perfringens str. 13 (cper0)
Gene : CPE0519
DDBJ      :CPE0519      two-component sensor histidine kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  66/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.122.1
:431 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   242->427 2bu8A PDBj 3e-09 10.8 %
:RPS:SCOP  291->427 1id0A  d.122.1.3 * 4e-06 17.3 %
:HMM:SCOP  283->432 1ysrA1 d.122.1.3 * 1.1e-11 21.4 %
:HMM:PFM   326->425 PF02518 * HATPase_c 4.1e-09 24.5 94/111  
:HMM:PFM   73->94 PF12465 * Pr_beta_C 0.00058 38.1 21/38  
:HMM:PFM   216->267 PF07889 * DUF1664 0.00057 19.2 52/126  
:BLT:SWISS 229->420 CITS_BACSU 5e-08 26.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80225.1 GT:GENE CPE0519 GT:PRODUCT two-component sensor histidine kinase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 645712..647007 GB:FROM 645712 GB:TO 647007 GB:DIRECTION + GB:GENE CPE0519 GB:PRODUCT two-component sensor histidine kinase GB:NOTE 431 aa, similar to pir:C55521 virS protein from Clostridium perfringens (440 aa); 32.5% identity in 234 aa overlap. Putative N-terminal signal sequence and 6 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80225.1 LENGTH 431 SQ:AASEQ MYVRNVIELFYVIYISFIGISSFFYLDKKIDLKKRVFTTIILNFFLLLINYIFYINELSCFFEALIIYIYYVYLYKKNTTSILMSSIYLLNLSLGKYILMFIYSVMIFDLEVLKIMNNIMFLCFIILLILMITVVVFIVNFFKECIINVNDLTIKKQTKLVFAIGIAVLLSEKVFDNIALNAGLVYRVNISTISIAVNLAIIHFITYKRFKEYKANSQINILEKQLDYQKNYYEKVINNYGEARKAIHDMNNHMSVIKYFLENKDYKNMDDYIQSLSERIVTNKDNNICSNKVINAICLDKCERCKKEGINIRFDTIINKKLKIDDLDLCIVLGNLIDNAIEACEKINDKEIQKVIQVSARIYLNQIYIKVINSKNNKVEKRNNKFLTSKKDKKNHGIGLENVKEAVHKNHGDIEIKDSKNTFEVSLYMKC GT:EXON 1|1-431:0| BL:SWS:NREP 1 BL:SWS:REP 229->420|CITS_BACSU|5e-08|26.6|188/542| TM:NTM 6 TM:REGION 6->27| TM:REGION 43->65| TM:REGION 86->108| TM:REGION 126->148| TM:REGION 159->181| TM:REGION 186->207| SEG 10->25|fyviyisfigissffy| SEG 37->56|fttiilnfflllinyifyin| SEG 65->75|liiyiyyvyly| SEG 119->139|imflcfiillilmitvvvfiv| RP:PDB:NREP 1 RP:PDB:REP 242->427|2bu8A|3e-09|10.8|186/359| HM:PFM:NREP 3 HM:PFM:REP 326->425|PF02518|4.1e-09|24.5|94/111|HATPase_c| HM:PFM:REP 73->94|PF12465|0.00058|38.1|21/38|Pr_beta_C| HM:PFM:REP 216->267|PF07889|0.00057|19.2|52/126|DUF1664| RP:SCP:NREP 1 RP:SCP:REP 291->427|1id0A|4e-06|17.3|133/146|d.122.1.3| HM:SCP:REP 283->432|1ysrA1|1.1e-11|21.4|140/0|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 111 OP:NHOMOORG 66 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------1----------------------2-----------------------------------------------------------------------------------------------------------------------------------------------------3---1----1-1--------------------1---11-----11--11--------------1-----------------------------11111111-162121111221-1-3333-222312-1-8C---11---21--1111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1---------------1----1-------------------------------111---------------------1--------------------------------------1----------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 218 STR:RPRED 50.6 SQ:SECSTR #####################################################################################################################################################################################################################HHHHHHHHHHHGGGcccTTcTTTTHHHHHHHHHHHHHHHHHHHHHHHHTccccccccccccTTcEEEEEHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccTTcccEEEEcHHHHHHHHHHHHHHHHHHHHTTTTccccccEEEEEEEcccEEEEEEEEEEcccHHHHGGGGcTTTTcccccccHHHHHHHHHHHTTcEEEEEEETTEEEEEEEEEE DISOP:02AL 224-237, 282-287| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHEEEEEEEccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEccEEEEEEEEccccccHHHHccccEEcccccccccHHHHHHHHHHHHccEEEEEEcccEEEEEEEEcc //