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Clostridium perfringens str. 13 (cper0)
Gene : CPE0523
DDBJ      :CPE0523      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  232/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:423 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   15->405 PF03611 * EIIC-GAT 1e-47 35.7 %
:HMM:PFM   10->403 PF03611 * EIIC-GAT 7e-106 35.5 392/412  
:BLT:SWISS 14->379 ULAA_SHIFL 3e-39 30.1 %
:TM
:REPEAT 2|9->197|214->420

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80229.1 GT:GENE CPE0523 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 649296..650567 GB:FROM 649296 GB:TO 650567 GB:DIRECTION + GB:GENE CPE0523 GB:PRODUCT conserved hypothetical protein GB:NOTE 423 aa, similar to gpu:AP001507_223 BH0223 gene product from Bacillus halodurans (432 aa); 35.8% identity in 374 aa overlap. Putative N-terminal signal sequence and 9 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80229.1 LENGTH 423 SQ:AASEQ MKEILDFCVSFFRNPALFMGLVVAIGLILQRKPIDAILKGIFKGIIGMVILLKGVDIVVSSITPLANAFSGLFNTQSNSTLGDFNVFLGQYGSYVGLILLCGFVINIIIARYTRFKTIYLTGNILFWYPMLFLAVGIENNVSGLKLFIFTLIMYILVITIFPYILRKHVKYVTGNDSFTIGHTASIYCLLGSYIGKLVGQKDKNIENLNLPKSLSFFRDTNITAAIVMFIVYIIVGLFIGKESRIAIYGSEPLITYSLIQGITFAAGMIILLTGVRMILGEIIPSFKGIADKLAKGSIPALDIPMIFPYGPNALLIGFIIALITSIGTLFLLGASGVLTFALIPLVVACYFDVAPGAIFANARGGWPAAIITSALGGIILMVLAAISLNLVSGTVGNFIQTYGGNEFSIWVIIGDLVGKLFSI GT:EXON 1|1-423:0| BL:SWS:NREP 1 BL:SWS:REP 14->379|ULAA_SHIFL|3e-39|30.1|362/465| TM:NTM 12 TM:REGION 5->27| TM:REGION 44->66| TM:REGION 92->113| TM:REGION 117->139| TM:REGION 144->165| TM:REGION 178->200| TM:REGION 220->241| TM:REGION 261->283| TM:REGION 312->334| TM:REGION 339->361| TM:REGION 370->392| TM:REGION 402->423| NREPEAT 1 REPEAT 2|9->197|214->420| RP:PFM:NREP 1 RP:PFM:REP 15->405|PF03611|1e-47|35.7|387/414|EIIC-GAT| HM:PFM:NREP 1 HM:PFM:REP 10->403|PF03611|7e-106|35.5|392/412|EIIC-GAT| GO:PFM:NREP 2 GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF03611|IPR004703| GO:PFM GO:0016021|"GO:integral to membrane"|PF03611|IPR004703| OP:NHOMO 361 OP:NHOMOORG 233 OP:PATTERN -------------------------------------------------------------------- ------1-111--------------------------------------------1-------1----1---------3-------------------------------------------------------------------------------------------------------------1-----------111-----141111----11-11--111211---11111111111111-----2---23-----22--35----1--112222222112222222222222222222222222122---2222----21111111212-2---121----11----------1---111-2-1------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-------1--------------------------------2-1212-1222111111-211111111221211111243422111333333333333333311-1111---111111111111------------------2222121----1--1---------------------------------------111111111-1122---------------------------------------1-1-121--222-11122---------------- -------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 423-424| PSIPRED cHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccEEEEEHHHHHHHHHHHHHHHccccHHcHHHccccHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHcccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEcEEccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHc //