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Clostridium perfringens str. 13 (cper0)
Gene : CPE0537
DDBJ      :CPE0537      probable transposase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  64/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
g.72.1
:90 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  31->74 1wj0A  g.72.1.1 * 3e-09 18.2 %
:RPS:PFM   31->84 PF07282 * Transposase_35 1e-08 54.7 %
:HMM:PFM   15->82 PF07282 * Transposase_35 2.7e-25 48.5 66/69  
:BLT:SWISS 1->75 YSNA_STRPR 2e-09 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80243.1 GT:GENE CPE0537 GT:PRODUCT probable transposase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 667372..667644 GB:FROM 667372 GB:TO 667644 GB:DIRECTION + GB:GENE CPE0537 GB:PRODUCT probable transposase GB:NOTE 90 aa, similar to gp:CPIS1136_1 C.perfringens IS1136 DNA from Clostridium perfringens (122 aa); 59.3% identity in 91 aa overlap IS1136 GB:PROTEIN_ID BAB80243.1 LENGTH 90 SQ:AASEQ MKNKHLSKAIASQKFFKFKTKLTVKCKENHIELRIVDRFYPSSKTCSQCGKVKKDLKLSDRIYKCDCGFTIDRDLNASINLKNAKEYKIA GT:EXON 1|1-90:0| BL:SWS:NREP 1 BL:SWS:REP 1->75|YSNA_STRPR|2e-09|36.0|75/402| SEG 14->27|kffkfktkltvkck| RP:PFM:NREP 1 RP:PFM:REP 31->84|PF07282|1e-08|54.7|53/70|Transposase_35| HM:PFM:NREP 1 HM:PFM:REP 15->82|PF07282|2.7e-25|48.5|66/69|Transposase_35| RP:SCP:NREP 1 RP:SCP:REP 31->74|1wj0A|3e-09|18.2|44/58|g.72.1.1| OP:NHOMO 156 OP:NHOMOORG 70 OP:PATTERN --------7114--------------------------------------------------11---- ---------------------1----------------12--49------------------1---2---1----21----------1------------------------------------------------------------7-11--1---------------1-------------1-------A-22222-21-2321-21-----1235--1--------------------------1--------------------------------------------------------------------------13---------1-----22-43532--4--11--------1---1-2--6------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3---------------------------------------1--------------------------------------------------------------------1---------------------------------------------------------------------------------22----------------------------------------------1-2---1---1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccccccccccccccccccccEEEEccccEEccHHHHHHHHHHHHHHHcc //