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Clostridium perfringens str. 13 (cper0)
Gene : CPE0642
DDBJ      :CPE0642      two-component response regulator
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  868/915 : Eukaryota  115/199 : Viruses  1/175   --->[See Alignment]
a.4.6c.23.1
:231 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->226 2oqrA PDBj 4e-49 41.7 %
:RPS:PDB   5->225 3c3wB PDBj 2e-31 21.0 %
:RPS:SCOP  5->123 1a0oA  c.23.1.1 * 4e-36 30.3 %
:RPS:SCOP  129->227 1gxpA  a.4.6.1 * 5e-20 30.6 %
:HMM:SCOP  1->193 1s8nA_ c.23.1.1 * 9.7e-46 33.9 %
:RPS:PFM   6->118 PF00072 * Response_reg 8e-19 48.6 %
:RPS:PFM   176->226 PF00486 * Trans_reg_C 3e-09 45.1 %
:HMM:PFM   6->118 PF00072 * Response_reg 7.2e-36 49.5 111/112  
:HMM:PFM   152->227 PF00486 * Trans_reg_C 1.2e-31 51.3 76/77  
:BLT:SWISS 3->226 PHOP_BACSU 3e-55 50.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80348.1 GT:GENE CPE0642 GT:PRODUCT two-component response regulator GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 804031..804726 GB:FROM 804031 GB:TO 804726 GB:DIRECTION + GB:GENE CPE0642 GB:PRODUCT two-component response regulator GB:NOTE 231 aa, similar to pir:D72228 response regulator DrrA from Thermotoga maritima (strain MSB8) (247 aa); 50.6% identity in 231 aa overlap GB:PROTEIN_ID BAB80348.1 LENGTH 231 SQ:AASEQ MTNKKVLIVDDEEHIRELIKFNLKKEGYDTEVAVNGTEALKVIREIKFDLILLDLMLPEIDGLEVCKEIRRNEETSDIPVMMITAKGEEFDKVLGLELGADDYITKPFSIRELMARVKALLRRSNVKKEENIIKFGDVVVNFKTREVTKGTQNVELTLKEFELLKLLIKNKGNILTRELLLDKIWGYEYIGETRTVDVHIRHLRKKIESDDKNPQYIQTIRGVGYKFTSNE GT:EXON 1|1-231:0| BL:SWS:NREP 1 BL:SWS:REP 3->226|PHOP_BACSU|3e-55|50.5|222/240| SEG 155->175|eltlkefellklliknkgnil| BL:PDB:NREP 1 BL:PDB:REP 6->226|2oqrA|4e-49|41.7|218/226| RP:PDB:NREP 1 RP:PDB:REP 5->225|3c3wB|2e-31|21.0|195/210| RP:PFM:NREP 2 RP:PFM:REP 6->118|PF00072|8e-19|48.6|111/111|Response_reg| RP:PFM:REP 176->226|PF00486|3e-09|45.1|51/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 6->118|PF00072|7.2e-36|49.5|111/112|Response_reg| HM:PFM:REP 152->227|PF00486|1.2e-31|51.3|76/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 5->123|1a0oA|4e-36|30.3|119/128|c.23.1.1| RP:SCP:REP 129->227|1gxpA|5e-20|30.6|98/103|a.4.6.1| HM:SCP:REP 1->193|1s8nA_|9.7e-46|33.9|189/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 18570 OP:NHOMOORG 1015 OP:PATTERN -----------------------943331634--32-122232NK-8k2ED7E-1-1111-------- Gjk7X566778655BBABB-BJ55BCBBBBB8IEFFBHIEENHLGC778BB8EFG65811LJS6U7LYRTC444465559MBD37DCCONnb-P223--F8T8LGnElGh1------12111112543B967D5J8looklPDIu8*q**qoHTUJK877BB9ahRL***V695565685555HGBAA576DDNaacbcYbcMcYdcaXMVLJGMbdjEHKfEIKCBBCBCtv8AA9A99899AAA9989996C675CC655466677CC655675686DED8769A99999999A99995555566667655A987758787FhORyVVVaZZaWXQMhZZBFIEXNW8BJOQO9pjdNJEBACAD9EH54AaXYXWWO9A999OLjfiOLMVbQWbFFEFEFFFEDJ-WZgXbcYmJWJ4cYYWZVVffZVSQTKJNJFMPKOOMNGFFFFFFFFCFEDCpNM33344444226A444444444443433333AIL8AHIHELccedkZaMMMJXXjjOMOOFOhdkUdcf23SXTuKUKJjUTcSBSdULROOfE2322212EDGRj*V**lNJ*fG**edn6*y**uy*WYigvj**VmRCCB8888888565655555RbCHP99cTEdcfjEZWKWRXYXOWVdYYUXYVaVhl--AEGFH------MKILHLHOOOPOOPQNO-OQONOONNNOOOOOONOOKNOOIKDEDNMNNNNNNMNNMNMNNNMLLMMNOB1HLMNNNLLNNNM--5I545438878GP*Ig555443254454115HGEGHAGACCQXnjomfvrxblmqkajgk321213212FOTRbPQQQQWYehjVWSOTOPPQRBBAB21*6QQFHJJ34423425622-------------------------9E6A9989897l3 ----CC--------D45757225632311-1-111-122221222334334525442-1333-2311213123332--1213332332--1-52422221723769-526------------------------------------------------6----4-1-------612573M43321S5AM66E53D244- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- STR:NPRED 231 STR:RPRED 100.0 SQ:SECSTR ccccEEEEEcccHHHHHHHHHHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGHHHHHHHHHHccTTTTccHHHTTTEEEEHcccTHcTTTTccHEEHHHHHHHTTTccHHHHHHHHTccHHHHHHHHHHHHHHTTccccccHHHHHHHHHTccccccc DISOP:02AL 1-2, 123-132, 229-231| PSIPRED ccccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEHHHHHHHHHHccccccccEEEEEEcEEEEEcccc //