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Clostridium perfringens str. 13 (cper0)
Gene : CPE0647
DDBJ      :CPE0647      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  11/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:362 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   10->320 PF03845 * Spore_permease 3.4e-20 20.8 308/320  
:BLT:SWISS 196->296 GERKB_BACSU 2e-04 25.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80353.1 GT:GENE CPE0647 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(808605..809693) GB:FROM 808605 GB:TO 809693 GB:DIRECTION - GB:GENE CPE0647 GB:PRODUCT hypothetical protein GB:NOTE 362 aa, no significant homology. Putative N-terminal signal sequence and 8 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80353.1 LENGTH 362 SQ:AASEQ MSLGKLTARHFIFFIIAAISTSLVNYTSLFIKIGGRDTWIFTIISGIIFFFVTSFIFSVISKIEYYDFKETCYIVLGKPLGNIYILIFSLTLVLMCIESASVSSSSINVNIFAQSPIWYCLLFFIITVFLIGKNRFNSILIICIVCVSIVLAINLLLALLNIRYIDYTLLLPIFKDRRISEYILCALTQLGSLSSLAIVLPILPRIDDKKNLKKISINTILLTSIFCALCVVILISTLGSLRSANVFYPQFVQTQRIYFGGFVENGNVFVMISSTLSWVVKYLITIFSLYTIWKDRVKYKRNFIALISVIVYAFSYLAAKNAYTLFILLRYYQYILLIVLFICPIIIYTLAYFKRQKFKYLK GT:EXON 1|1-362:0| BL:SWS:NREP 1 BL:SWS:REP 196->296|GERKB_BACSU|2e-04|25.7|101/100| TM:NTM 10 TM:REGION 7->29| TM:REGION 40->62| TM:REGION 74->96| TM:REGION 112->133| TM:REGION 142->164| TM:REGION 182->204| TM:REGION 216->238| TM:REGION 269->291| TM:REGION 302->324| TM:REGION 327->349| SEG 11->19|fiffiiaai| SEG 40->61|iftiisgiifffvtsfifsvis| SEG 101->111|svssssinvni| SEG 138->162|siliicivcvsivlainlllallni| SEG 325->340|lfillryyqyillivl| HM:PFM:NREP 1 HM:PFM:REP 10->320|PF03845|3.4e-20|20.8|308/320|Spore_permease| OP:NHOMO 11 OP:NHOMOORG 11 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111----1--11-1-----111-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEccccEEEEHHHHHHHHHHHHHHHHEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEEEEEcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEcccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //