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Clostridium perfringens str. 13 (cper0)
Gene : CPE0736
DDBJ      :CPE0736      probable transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  73/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:443 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   205->386 PF00324 * AA_permease 3e-06 27.6 %
:HMM:PFM   11->406 PF00324 * AA_permease 2.9e-18 18.3 382/479  
:BLT:SWISS 6->379 CTR2_CHICK 5e-07 28.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80442.1 GT:GENE CPE0736 GT:PRODUCT probable transporter GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 913050..914381 GB:FROM 913050 GB:TO 914381 GB:DIRECTION + GB:GENE CPE0736 GB:PRODUCT probable transporter GB:NOTE 443 aa, similar to gpu:AP001510_169 BH0994 gene product from Bacillus halodurans (395 aa); 24.9% identity in 369 aa overlap. Putative N-terminal signal sequence and 11 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80442.1 LENGTH 443 SQ:AASEQ MKEIKLSRIDIFSIVLGAIIGWGSFMLPGTKFLKESGVINTFLGLFLGVICIIIIEKNYLIMMQTHDEEGGEFSFTYNNLGKKHGFIVGWFLTLAYFTMIPLNATAFPLVIKKIFGGILEFGYLYNVAGYNIYLGEILTSSIIIIAFAALNLNGIKKTSKVQNLIIFSLISMTFIVLVGMIIKGNRIDFINTYINKYSFDLSQIIKVFAITPFAFIGFDAIPQLSKELNFSKKKASRVAVISLVMGALIYNILNIITALAYSPEQASSLEWAAGSAVLSILGKGAFFLLIIALTAAVWSGINGFMICSSKLLGSIANYKMLPSKMGKVNKNGVFSNAIIFITIVSLIAPWFGRQAIIWIVDMSSLGASVAYFYVSFIVLKESKNTKDKILAGIGVVISIIFMLLLILPISPAALSKESLIALIVWCIIGFIAYYKIQKDNIEA GT:EXON 1|1-443:0| BL:SWS:NREP 1 BL:SWS:REP 6->379|CTR2_CHICK|5e-07|28.1|363/654| TM:NTM 12 TM:REGION 5->27| TM:REGION 34->56| TM:REGION 90->111| TM:REGION 134->155| TM:REGION 161->183| TM:REGION 200->222| TM:REGION 238->260| TM:REGION 279->301| TM:REGION 330->352| TM:REGION 358->380| TM:REGION 388->410| TM:REGION 415->437| SEG 137->155|iltssiiiiafaalnlngi| SEG 285->296|afflliialtaa| SEG 403->415|lllilpispaals| RP:PFM:NREP 1 RP:PFM:REP 205->386|PF00324|3e-06|27.6|174/429|AA_permease| HM:PFM:NREP 1 HM:PFM:REP 11->406|PF00324|2.9e-18|18.3|382/479|AA_permease| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF00324|IPR004841| GO:PFM GO:0016020|"GO:membrane"|PF00324|IPR004841| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00324|IPR004841| OP:NHOMO 79 OP:NHOMOORG 73 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------1-----------------1------------1-----------------------------------------------------------------------------------------------------------------1-111111111111111-111--111----2----------11111111111111111112--------1-111----------------------------------------------------------1----1-1111-1------222-1-----1--------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---1-111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------111---------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 441-443| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccc //