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Clostridium perfringens str. 13 (cper0)
Gene : CPE0783
DDBJ      :CPE0783      probable thioredoxin reductase
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  899/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
c.3.1c.47.1
:556 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->311 2q7vB PDBj 8e-53 40.9 %
:BLT:PDB   363->540 1j08A PDBj 4e-20 28.8 %
:RPS:PDB   3->312 2a87A PDBj 1e-48 37.2 %
:RPS:PDB   462->541 3c1rA PDBj 1e-04 13.8 %
:RPS:SCOP  5->106 1b4vA1  c.3.1.2 * 2e-10 17.6 %
:RPS:SCOP  86->308 1gv4A1  c.3.1.5 * 1e-20 9.2 %
:RPS:SCOP  349->459 1hyuA3  c.47.1.2 * 4e-23 32.3 %
:RPS:SCOP  465->544 1hyuA4  c.47.1.2 * 2e-07 35.0 %
:HMM:SCOP  1->310 1f8rA1 c.3.1.2 * 5.3e-47 27.5 %
:HMM:SCOP  349->462 1hyuA3 c.47.1.2 * 8.9e-24 42.2 %
:HMM:SCOP  463->557 1hyuA4 c.47.1.2 * 3.5e-18 19.6 %
:RPS:PFM   6->284 PF07992 * Pyr_redox_2 1e-17 30.6 %
:HMM:PFM   6->282 PF07992 * Pyr_redox_2 3.3e-43 30.4 191/202  
:HMM:PFM   298->335 PF01466 * Skp1 0.00097 28.9 38/78  
:BLT:SWISS 1->309 TRXB_EUBAC 6e-77 46.6 %
:PROS 376->388|PS00018|EF_HAND_1
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80489.1 GT:GENE CPE0783 GT:PRODUCT probable thioredoxin reductase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 965438..967108 GB:FROM 965438 GB:TO 967108 GB:DIRECTION + GB:GENE CPE0783 GB:PRODUCT probable thioredoxin reductase GB:NOTE 556 aa, similar to pir:D35156 thioredoxin reductase (NADPH) (EC 1.6.4.5) from Eubacterium acidaminophilum (315 aa); 50.8% identity in 309 aa overlap. 2 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80489.1 LENGTH 556 SQ:AASEQ MSKIYDLVIIGGGPAGLSAGIYAGRAKMNTLIIEKGELGGQVNKTFDISNYPGSRNTNGPKLMSEMRAQAEDFKVKFMNGEVLEVSLEGDIKEIKTDKGLVQGRSVIIATGAAPRQLGFKGEEEFTGRGVAYCATCDGQFFEGLEVFVIGAGFAAAEEAIFLTRFASKVTVIAREPEFTCAKSIADKVLSNPKIEVKFNTEIIEAKGKDMVNYAKFKNNVTGEIFEYRAKKEDGAFGIFVFVGYAPKSELFKDILELDKQGYIITNEDMETNINGVYVAGDLRPKSLRQIVTAVSDGAIAATTAERYVKELKEKLGIEDEYLEEEENIQEEKNSDENNDLGNISRKSSLLNDVLRAQLKGILSKIENEVTLVSIVDRSNTKSIELRDLVLDISDLGEKINAKIFNRGENKEVEEKINADKYPIVALLDENENYSGIKFHGVPGGHELNSFILAIYNLGGPGQGIDEGVLDEIKKLDKKTNIKVCVSLSCHLCPDVVVSAQRIAKENKNIEAEMIDLANFKDIKDEFKIMSVPALIVNNKDVYFGSKKIEEILEIIK GT:EXON 1|1-556:0| BL:SWS:NREP 1 BL:SWS:REP 1->309|TRXB_EUBAC|6e-77|46.6|309/315| PROS 376->388|PS00018|EF_HAND_1|PDOC00018| COIL:NAA 18 COIL:NSEG 2 COIL:REGION 305->314| COIL:REGION 320->327| SEG 145->161|evfvigagfaaaeeaif| SEG 313->336|eklgiedeyleeeeniqeeknsde| SEG 546->555|kkieeileii| BL:PDB:NREP 2 BL:PDB:REP 5->311|2q7vB|8e-53|40.9|301/309| BL:PDB:REP 363->540|1j08A|4e-20|28.8|177/225| RP:PDB:NREP 2 RP:PDB:REP 3->312|2a87A|1e-48|37.2|304/313| RP:PDB:REP 462->541|3c1rA|1e-04|13.8|80/110| RP:PFM:NREP 1 RP:PFM:REP 6->284|PF07992|1e-17|30.6|268/275|Pyr_redox_2| HM:PFM:NREP 2 HM:PFM:REP 6->282|PF07992|3.3e-43|30.4|191/202|Pyr_redox_2| HM:PFM:REP 298->335|PF01466|0.00097|28.9|38/78|Skp1| RP:SCP:NREP 4 RP:SCP:REP 5->106|1b4vA1|2e-10|17.6|102/366|c.3.1.2| RP:SCP:REP 86->308|1gv4A1|1e-20|9.2|206/224|c.3.1.5| RP:SCP:REP 349->459|1hyuA3|4e-23|32.3|99/102|c.47.1.2| RP:SCP:REP 465->544|1hyuA4|2e-07|35.0|80/96|c.47.1.2| HM:SCP:REP 1->310|1f8rA1|5.3e-47|27.5|298/371|c.3.1.2|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 349->462|1hyuA3|8.9e-24|42.2|102/102|c.47.1.2|1/1|Thioredoxin-like| HM:SCP:REP 463->557|1hyuA4|3.5e-18|19.6|92/96|c.47.1.2|2/2|Thioredoxin-like| OP:NHOMO 1934 OP:NHOMOORG 1089 OP:PATTERN 22111244444444432122111125312432111111111111111111111122222223221111 2231311111121211112-12111211111122222353131231121111432122--1112122231112222222213124111222212221-12111323131211111111111111122122221222222341112-3-121111111122211-11212212122222122221213322144444444444444444422443344433333342222225422222222222222222222322122121112233222124313333333233233222222222222332333333333221222222311235333333333323222332223313123244232223412221322112322311111222111122312211111111111122122121121121112131111112111221111111111111111122211222221111111112111222121221111113212112211244242221112276222212334111222222222322221322221222111111111111132211113352354431111111121214212141111111111111111111111111112222222122122222222222222222221-2111111111122221212222222222-2232222222222222223222221122222112111222222122222221111111111111111-2111111111121121111111111-11114435423222223333232332222422211111111111112111112222233334332232222111122111111111111114----1-11111111111111111112222322222111 ----111----122311112111111111111111111111111111111111111211111111111-1221112212211111121-11111111111111221113------------------------------------------------------1------1---11331-111324343132111---3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 509 STR:RPRED 91.5 SQ:SECSTR ccccEEEEEEccHHHHHHHHHHHHHTTcccEEEcccccccGGGccccccccTTcTTccHHHHHHHHHHHHHHTTcEEEcccEEEEEcccccEEEEETTccEEEEEEEEcccEEEcccccTHHHHTcTTTEEccHHHHGGGGTTcEEEEEcccHHHHHHHHHHTTTccEEEEEcccccccccTTHHHHHHHcTTEEEEccEEEEEEEccccccEEEEEEETTcccEEEcccEEEccccEEEcccEEEccTTTcTccccTTccccccTTccccccTTEEEcGGGTccccccHHHHHHHHHHHHHHHHHHHHHHH####################################cccHHHHHHHHHHHTTccccEEEEEEcccccHHHHHHHHHHHHHHHHHcTTTEEEEcTTTcHHHHHHTTcccccEEEEEccccccEHHEEEccccGGGHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHccEEEEEccccHHHHHHHHHHHTTccccGEGGGcTTHHHHHHHHHHHHccccccEEEETTEEEEEcc########### DISOP:02AL 323-337| PSIPRED ccccEEEEEEcccHHHHHHHHHHHHccccEEEEEccccccEEEEccccccccccccccHHHHHHHHHHHHHHcccEEEEEEEEEEEccccEEEEEEccEEEEEEEEEEEcccccccccccccHHHccccEEEEccccHHHccccEEEEEEccHHHHHHHHHHHHHccEEEEEEEcccccccHHHHHHHHHccccEEEEccEEEEEEEcccEEEEEEEEccccEEEEccccEEEEEEEEEEEEcccccHHHHHHHEEEccccEEEEccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccHHHHHcccccccEEEEEEccHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHccccccEEEEEEccccccccEEEEEEccccHHHHHHHHHHHHccccccccHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHcccccccEEEEccEEEEEccccHHHHHHHHc //