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Clostridium perfringens str. 13 (cper0)
Gene : CPE0830
DDBJ      :CPE0830      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  286/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
:451 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   22->183 PF01554 * MatE 1e-10 27.3 %
:HMM:PFM   22->183 PF01554 * MatE 1.2e-29 24.8 161/162  
:HMM:PFM   245->404 PF01554 * MatE 1e-23 26.4 159/162  
:BLT:SWISS 5->394 MEPA_STAAW 1e-34 27.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80536.1 GT:GENE CPE0830 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1013773..1015128) GB:FROM 1013773 GB:TO 1015128 GB:DIRECTION - GB:GENE CPE0830 GB:PRODUCT conserved hypothetical protein GB:NOTE 451 aa, similar to gpu:AP001514_169 BH2163 gene product from Bacillus halodurans (464 aa); 34.8% identity in 428 aa overlap. 9 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80536.1 LENGTH 451 SQ:AASEQ MNHDYILGKEKIFTALMKLSIPATVAMLINAIYNIVDTIFVGREIGALGIAGVSVYLPLQMIMMSLASLIGVGTASIFSRKIGNNDLEGANKAFGNLILLVYLFSIFTFIFGFIFLEELVRFLGASNEVLPYAIDYARSILPGVLFFPICVAANNIIRAEGSAKDAMCCMSIGMISNIFLDYLFICKLNMGITGAGLATSISKSLSFSYLTYYILNKSSVKLKLKYLKFDFSILKKIISIGTSAFITQVSISLVALLLNHSLVKYGGNFALSIYGIIYKLTLFIQMPLSGLVQGMQPIIGFSTGANNRTRVINTFKLTLIISTFIATTLTLIILIKTDMFMKLFTTDINLINEGSKVLKSNIIMYPFLGIYLTSIGFYQSTGKGKESLILSLLRQFIFFIPLSIILPSLFNLGIWGIWLAFPISDFLAFICTLVIAKITINKKAINPKIIN GT:EXON 1|1-451:0| BL:SWS:NREP 1 BL:SWS:REP 5->394|MEPA_STAAW|1e-34|27.0|378/451| TM:NTM 10 TM:REGION 17->39| TM:REGION 54->76| TM:REGION 95->117| TM:REGION 131->153| TM:REGION 172->194| TM:REGION 237->259| TM:REGION 269->291| TM:REGION 314->336| TM:REGION 386->408| TM:REGION 416->438| SEG 104->115|fsiftfifgfif| SEG 215->228|lnkssvklklkylk| SEG 317->337|ltliistfiattltliilikt| SEG 396->412|fiffiplsiilpslfnl| SEG 435->450|iakitinkkainpkii| RP:PFM:NREP 1 RP:PFM:REP 22->183|PF01554|1e-10|27.3|161/161|MatE| HM:PFM:NREP 2 HM:PFM:REP 22->183|PF01554|1.2e-29|24.8|161/162|MatE| HM:PFM:REP 245->404|PF01554|1e-23|26.4|159/162|MatE| GO:PFM:NREP 5 GO:PFM GO:0006855|"GO:drug transmembrane transport"|PF01554|IPR002528| GO:PFM GO:0015238|"GO:drug transmembrane transporter activity"|PF01554|IPR002528| GO:PFM GO:0015297|"GO:antiporter activity"|PF01554|IPR002528| GO:PFM GO:0016020|"GO:membrane"|PF01554|IPR002528| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01554|IPR002528| OP:NHOMO 787 OP:NHOMOORG 327 OP:PATTERN --1-1------------------11222111-43111-33434-1122-2746-2423324---1--- ----------------------------------------------------111----------------1---4331274----1-55651832-----2-122---2--------------------1---11--------2-2-----------------------1-------------------1-1-11111112-1111112322-1114---1112333333-3-111111111111111--11113-11-1-1-22221122----222---1-11-1111111111111---------1----221112222-864A999999AA982D768666F43581FA--55-1-233-1121-1642------------------------------------------------1--111-1-1--------1-------------------------------------------------------------------------------------------------------------------11--------------11-11-1-------1-1-1---1----132--111-1-11-111111111111--1--33-1112112312223-2223322321233-------------1---------1-11--------------------------------------------------------------------------------------4---1-----------------1----1----------------------------2262222233433---1-11----------D11----111111115---------------------------3333223222--2 -----------2----1---------------------------------------------------------------------------1----------------------1---------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcc //