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Clostridium perfringens str. 13 (cper0)
Gene : CPE0967
DDBJ      :CPE0967      probable glutamate/ aspartate transporter
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  229/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
f.49.1
:387 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->382 2nwxC PDBj 1e-13 28.2 %
:RPS:SCOP  49->375 1xfhA  f.49.1.1 * 6e-32 23.9 %
:HMM:SCOP  8->382 2nwwA1 f.49.1.1 * 8.8e-69 31.4 %
:RPS:PFM   146->375 PF00375 * SDF 1e-17 32.4 %
:HMM:PFM   8->378 PF00375 * SDF 1.6e-71 28.2 365/390  
:BLT:SWISS 152->385 EAA6_CAEEL 3e-15 26.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80673.1 GT:GENE CPE0967 GT:PRODUCT probable glutamate/ aspartate transporter GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 1164789..1165952 GB:FROM 1164789 GB:TO 1165952 GB:DIRECTION + GB:GENE CPE0967 GB:PRODUCT probable glutamate/ aspartate transporter GB:NOTE 387 aa, similar to pir:G71309 probable glutamate/ aspartate transporter from Treponema pallidum (396 aa); 51.5% identity in 355 aa overlap. Putative N-terminal signal sequence and 8 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80673.1 LENGTH 387 SQ:AASEQ MKKLFNNLIFKLVLGVILGIIIGTYSSEGLMSTIVTIKYVLGQIIFFSVPLIILGFIAPSIAKLKDNASKLLGYAVLIAYLSSVFAAILSMIAGYALIPKLSIVSNIASLKELPELIFKLDIPPVMSVMSALALALLLGLAVGWTKADLVEKLLDQFQAIVLSIVNKIIIPILPFFIATNFAALAYEGGLSNQLPVFFKVILIVLFGHFIWLTILYLIGGAISKENPWEVVKYYGPAYLTAVGTMSSAATLPVALESAKKSKALREDIVDFAIPLCSNIHLCGSVLTEVFFVMTVSQILYGKIPSLPTMILFIVLLGVFAIGAPGVPGGTVMASLGLIISVLAFDEAGTALMLTIFALQDSFGTACNVTGDGAIALMLTGIAKKKNL GT:EXON 1|1-387:0| BL:SWS:NREP 1 BL:SWS:REP 152->385|EAA6_CAEEL|3e-15|26.8|228/542| TM:NTM 10 TM:REGION 5->27| TM:REGION 35->57| TM:REGION 78->100| TM:REGION 124->146| TM:REGION 158->180| TM:REGION 194->216| TM:REGION 229->251| TM:REGION 270->292| TM:REGION 303->325| TM:REGION 337->359| SEG 12->23|lvlgvilgiiig| SEG 131->141|alalalllgla| BL:PDB:NREP 1 BL:PDB:REP 37->382|2nwxC|1e-13|28.2|330/401| RP:PFM:NREP 1 RP:PFM:REP 146->375|PF00375|1e-17|32.4|225/392|SDF| HM:PFM:NREP 1 HM:PFM:REP 8->378|PF00375|1.6e-71|28.2|365/390|SDF| GO:PFM:NREP 3 GO:PFM GO:0006835|"GO:dicarboxylic acid transport"|PF00375|IPR001991| GO:PFM GO:0016020|"GO:membrane"|PF00375|IPR001991| GO:PFM GO:0017153|"GO:sodium:dicarboxylate symporter activity"|PF00375|IPR001991| RP:SCP:NREP 1 RP:SCP:REP 49->375|1xfhA|6e-32|23.9|322/405|f.49.1.1| HM:SCP:REP 8->382|2nwwA1|8.8e-69|31.4|370/0|f.49.1.1|1/1|Proton glutamate symport protein| OP:NHOMO 524 OP:NHOMOORG 305 OP:PATTERN --1-1-------------------1-----1------------------11-1---11112------1 -----111111111--------------------------------1--------11----------------------1-1---1--1112-2111---1--1121-1--------11111111------------------------1------------------------------------------1-33333333233333321221-3331-1-3-2------2-1--------------2--121----------11----------------------------------------------------------12--5555545353-111533313-51-1------1---3--111--21------------------------------------------------1-------------------------------------------2221111111--------1------2-12-----------1----1------------------------------------------1--11-------111--1--1-1--11-----1-1------1-----11---1--------------------1---22-21-131211223312133332312311--------------------1111111111-11-1111111111--1--1-------------------------111--11-----------------1-------------1--------------------------11111---11----1-------------11152222122222----------1------6--1111---------11-------------------------------------- ------------------1---------1----------------------11-12-1---------------------------------------------------1-3636321-1114154-2-371-3-1121-3--22122--1-231323113-112-----33411---------11---1-22-111-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 330 STR:RPRED 85.3 SQ:SECSTR ####################################HHHHHHHHHHHH###HHHTTcccTTTTHHHHHHHHHHHHHH####HHHHHHHHHHHHHHHccccccccccccccccccccHHHGGGcccccHHHHHHHHHHHHHHHHHHHTcccTTHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHGG#GccTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccHHHHHHHTHHHHHHHHHHccHHHHHHHHHHHHHT#TTccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHT#TccccccccHHHHHHHHHHHHHccccccHHHHHHHHHTTTTccTTcHHHHHHGGGHHHHHHHHHHHHHHHH######HHHHH##### DISOP:02AL 1-4, 386-387| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //