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Clostridium perfringens str. 13 (cper0)
Gene : CPE0969
DDBJ      :CPE0969      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  12/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.55.1
:636 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  486->609 1e5wA2  b.55.1.5 * 9e-05 20.0 %
:RPS:PFM   341->490 PF04632 * FUSC 9e-10 26.4 %
:HMM:PFM   343->493 PF04632 * FUSC 1.3e-11 24.2 149/650  
:BLT:SWISS 339->564 YCCS_ECOLI 2e-09 27.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80675.1 GT:GENE CPE0969 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 1167573..1169483 GB:FROM 1167573 GB:TO 1169483 GB:DIRECTION + GB:GENE CPE0969 GB:PRODUCT conserved hypothetical protein GB:NOTE 636 aa, partially similar to pir:H81242 conserved hypothetical protein NMB0050 from Neisseria meningitidis (716 aa); 20.4% identity in 289 aa overlap. Putative N-terminal signal sequence and 9 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB80675.1 LENGTH 636 SQ:AASEQ MWKKQIMYLKMFLIVVISILIFVLLFGKENLFIGLAAVITVTTMFGEDYTINPIHHTLYFIGVELFVGLGAYFAGLNPILGAIMTLIVSFFIYFAFTYDTKPTKSLGFIQLYLFLLYEPVTTSELPKRVFALVFGGIVIMTLYYTLARYNFNNIFNKSIKGCINSLIENLNELINTGCIEKDNSEKVALMIKELEIKVHERLELDKNQVYSIYSKDLIVVFLKRVSSLSSEAMKRDVNKELIKKTIELLKNVQDFIEDGNKEELKNILNEYYNYLDSFKLRDDLDRYSYYNAKLSVKEFLQGLNVKENQIESYSNYIANFLKALKSNSNNFRKSLNIRSLRFNLAVKAAITLAFSVFIVNYFEIFQGKWALFTISLLLIPYAEQSNKKAKARVLGTIIGAILFNVIFYFIQSNVILIFAFIVVCIYLSMSVVSYKIRCIFITLNALLMAGVMDPSHTPYYVLSEYRVFFILIASIIVAIVMNYIFPYKMKDETNKAIKLYVYLNERILDGLIEENSDKEKLVLSFFESYRIWKKINYNNKEMKSEQIQELLILQNDFVSDVNFLIKSPMIHNNKSLFKKSFEDFKNYTKKKDFEDLAIEDLEKAKTEEERLILVLLYKLFYVVKEMGKLSDLICKE GT:EXON 1|1-636:0| BL:SWS:NREP 1 BL:SWS:REP 339->564|YCCS_ECOLI|2e-09|27.1|218/717| TM:NTM 8 TM:REGION 6->28| TM:REGION 68->90| TM:REGION 95->117| TM:REGION 129->151| TM:REGION 353->375| TM:REGION 399->421| TM:REGION 437->459| TM:REGION 464->486| SEG 12->26|flivvisilifvllf| SEG 163->175|inslienlnelin| SEG 239->250|kelikktiellk| SEG 611->624|lilvllyklfyvvk| RP:PFM:NREP 1 RP:PFM:REP 341->490|PF04632|9e-10|26.4|148/515|FUSC| HM:PFM:NREP 1 HM:PFM:REP 343->493|PF04632|1.3e-11|24.2|149/650|FUSC| RP:SCP:NREP 1 RP:SCP:REP 486->609|1e5wA2|9e-05|20.0|105/148|b.55.1.5| OP:NHOMO 25 OP:NHOMOORG 13 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3-2-1--1453-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------11-------------------1------------------------------------------------------- ---------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //