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Clostridium perfringens str. 13 (cper0)
Gene : CPE1014
DDBJ      :CPE1014      probable flavoprotein
Swiss-Prot:             

Homologs  Archaea  62/68 : Bacteria  679/915 : Eukaryota  105/199 : Viruses  0/175   --->[See Alignment]
c.23.5c.3.1d.157.1g.41.5
:878 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->394 1ycgA PDBj 2e-55 34.3 %
:BLT:PDB   469->786 1q1wA PDBj 1e-26 27.0 %
:RPS:PDB   4->398 1e5dA PDBj 4e-49 29.4 %
:RPS:PDB   428->461 1b71A PDBj 3e-06 35.3 %
:RPS:PDB   475->870 1d7yA PDBj 2e-34 23.2 %
:RPS:SCOP  5->245 1e5dA2  d.157.1.3 * 9e-86 36.6 %
:RPS:SCOP  256->405 1e5dA1  c.23.5.1 * 3e-44 23.5 %
:RPS:SCOP  425->463 1b71A2  g.41.5.1 * 2e-07 30.8 %
:RPS:SCOP  535->584 1fcdA2  c.3.1.5 * 1e-09 25.6 %
:RPS:SCOP  563->792 1gv4A1  c.3.1.5 * 1e-24 15.6 %
:HMM:SCOP  1->248 1ycgA2 d.157.1.3 * 3.1e-59 25.7 %
:HMM:SCOP  255->400 1vmeA1 c.23.5.1 * 7.4e-37 41.5 %
:HMM:SCOP  421->464 1dvbA2 g.41.5.1 * 1.1e-08 43.2 %
:HMM:SCOP  462->675 1gv4A1 c.3.1.5 * 2e-38 32.2 %
:HMM:SCOP  585->793 1mo9A1 c.3.1.5 * 1.2e-37 29.8 %
:RPS:PFM   67->167 PF00753 * Lactamase_B 4e-09 35.0 %
:RPS:PFM   267->375 PF03358 * FMN_red 7e-07 38.0 %
:RPS:PFM   537->761 PF07992 * Pyr_redox_2 3e-13 32.0 %
:HMM:PFM   474->763 PF07992 * Pyr_redox_2 1.9e-39 36.1 194/202  
:HMM:PFM   32->226 PF00753 * Lactamase_B 3.7e-24 27.0 178/194  
:HMM:PFM   261->392 PF00258 * Flavodoxin_1 3.4e-11 20.9 129/143  
:BLT:SWISS 6->409 FPRA_RHOCA 6e-85 43.0 %
:BLT:SWISS 429->460 RUBR2_CHLTE 7e-04 59.4 %
:BLT:SWISS 475->866 NASD_BACSU 3e-44 34.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80720.1 GT:GENE CPE1014 GT:PRODUCT probable flavoprotein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1215859..1218495) GB:FROM 1215859 GB:TO 1218495 GB:DIRECTION - GB:GENE CPE1014 GB:PRODUCT probable flavoprotein GB:NOTE 878 aa, similar to gp:RCAFDXC_3 ORFU1 product, potential FMN-protein from Rhodobacter capsulatus (435 aa); 42.6% identity in 404 aa overlap GB:PROTEIN_ID BAB80720.1 LENGTH 878 SQ:AASEQ MNYLEVKKDIYWVGSLDPELRVFDIIMYTPYGTTYNSYVVKGSEKIAVFETVKEKCFDDYLSKLNSLGIDPKSIDYIVVDHTEPDHAGSVEKLLELSPKAKVIGSMQAIEFLKDIVNKDFEYIVVGDNDTISLGNKTLQFISAPFLHWPDSMYTYIPEDKALITCDSFGSHYSCEEVFNDLVPNEEEYLDALRYYYDCIFGPYKPYVLKAIDKIKDLDIELVCPGHGPILRQDPWKIINTYKEWSTPVKPKINGDKKVTIPYVSAYGYTKELAEEIAKGIQSEHNVEVKLYDLTYSKQEDVLADIGESDGILFGSPTIVGELLPPIRILLANLNPIIHGGKYAAAFGSFGWSGEAVPRIEARLKELKMNIFGPGLRIKFKPSTTELKEAFEFGRDFSRTMFGEKELDYAPNNATETKEVLTGNGKTRYWKCLVCGEIFESPVCPEVCPVCGAGKEQFIEVEMDTFEKNDTNDNFVIIGNGAAGFYAAKTIREINSTASVKLLSSEEVSSYSRPNLSDLLNEEMNLDTFYLAKSSWYKENNIEELLGVTVTSIDKDAKKVILKDGTEIPYTKLILANGSHNFIPPFRIKNNDEEVTLNCENIHEFKGIYSIKDLKDTFDVKEEMKEAKKAVVIGAGPLGLEAAWEMKLAGLDVTVVEFLPNLMNNQLDQEGADIFKNQVSDCGITFITSDECTEIITKDSKLTSLNLKSGKTLDADILLVSTGIRSNIELAKESGIECNRGVIVNERMETSVKDIYACGDVAEFNGLVYGNWPAAIEMGKTAGANACEAEKAFENFTPSIILDALNTHVFSAGLIRFNDSSYEKISSKDESKGQYTKLFFKDNILVGGIIVGDISKAGQIIIAIDNKLSKAAALSNDLL GT:EXON 1|1-878:0| BL:SWS:NREP 3 BL:SWS:REP 6->409|FPRA_RHOCA|6e-85|43.0|400/435| BL:SWS:REP 429->460|RUBR2_CHLTE|7e-04|59.4|32/52| BL:SWS:REP 475->866|NASD_BACSU|3e-44|34.8|371/805| SEG 498->511|svkllsseevssys| SEG 619->631|vkeemkeakkavv| BL:PDB:NREP 2 BL:PDB:REP 10->394|1ycgA|2e-55|34.3|376/398| BL:PDB:REP 469->786|1q1wA|1e-26|27.0|307/422| RP:PDB:NREP 3 RP:PDB:REP 4->398|1e5dA|4e-49|29.4|388/401| RP:PDB:REP 428->461|1b71A|3e-06|35.3|34/191| RP:PDB:REP 475->870|1d7yA|2e-34|23.2|371/401| RP:PFM:NREP 3 RP:PFM:REP 67->167|PF00753|4e-09|35.0|100/171|Lactamase_B| RP:PFM:REP 267->375|PF03358|7e-07|38.0|108/149|FMN_red| RP:PFM:REP 537->761|PF07992|3e-13|32.0|197/275|Pyr_redox_2| HM:PFM:NREP 3 HM:PFM:REP 474->763|PF07992|1.9e-39|36.1|194/202|Pyr_redox_2| HM:PFM:REP 32->226|PF00753|3.7e-24|27.0|178/194|Lactamase_B| HM:PFM:REP 261->392|PF00258|3.4e-11|20.9|129/143|Flavodoxin_1| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00753|IPR001279| RP:SCP:NREP 5 RP:SCP:REP 5->245|1e5dA2|9e-86|36.6|238/249|d.157.1.3| RP:SCP:REP 256->405|1e5dA1|3e-44|23.5|149/152|c.23.5.1| RP:SCP:REP 425->463|1b71A2|2e-07|30.8|39/44|g.41.5.1| RP:SCP:REP 535->584|1fcdA2|1e-09|25.6|43/141|c.3.1.5| RP:SCP:REP 563->792|1gv4A1|1e-24|15.6|205/224|c.3.1.5| HM:SCP:REP 1->248|1ycgA2|3.1e-59|25.7|245/0|d.157.1.3|1/1|Metallo-hydrolase/oxidoreductase| HM:SCP:REP 255->400|1vmeA1|7.4e-37|41.5|142/148|c.23.5.1|1/1|Flavoproteins| HM:SCP:REP 421->464|1dvbA2|1.1e-08|43.2|44/44|g.41.5.1|1/1|Rubredoxin-like| HM:SCP:REP 462->675|1gv4A1|2e-38|32.2|199/0|c.3.1.5|1/2|FAD/NAD(P)-binding domain| HM:SCP:REP 585->793|1mo9A1|1.2e-37|29.8|198/0|c.3.1.5|2/2|FAD/NAD(P)-binding domain| OP:NHOMO 2269 OP:NHOMOORG 846 OP:PATTERN --12122222232311321121171111221132444343324221221244214553665-122--- -13141-222311153344-45--33444441454526CE1122113-3111318-11--32911363421-111---2-121231--33421423---113122233-----------------221322223221----1112-354244422222222222422665222222222222221-11551-23333333132333323522222332-2-21222-----143111111111111111323-213-11-1---24--2131212123311121111221111-1111111111111111111233111333454547777777757335222555573321123165532434354438242-2231121----564332431122222122122222-33233232252-433455944555144212232222211------------16-1--------------------------1---1342-231-2234455244445544444414619265212222541223334422252211---------222552168363322442332141145386--1--325----1---------------211-21153525311212-----242----1-33-41----3-2------42121414442433344-444443334443434444354444--1333333333323333353333334--122222212222----1111111--16232---------------5453525143212222212333242333311---1--144454-----32666---1111-------111422----1---1--131211112-1-2--------31--1---222235154522- -1---13----1112222111-21111--1111-------------22--132711212------------------------------1212313----1--2-1-1-2349349-11---2133-3-391-313-----1111-1--------3321--5-31117---31211443W233346234-46222122- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 875 STR:RPRED 99.7 SQ:SECSTR EEEEEEETTEEEEEEEETTccEETTTEEcTTcEEEEEEEEcccccEEEEccccGGGHHHHHHHHHcTTccGGGccEEEEccccHHHHTTHHHHHHHHcccEEEEEHHHHHHHHHHHcccccEEEEcTTcEEEccccEEEEEEcTTcccTTcEEEEETTTTEEEEETTTccccccccccGGGccHHHHHHHHEHHHHHHHTGGGHHHHHHHHHHHHTccccEEEEcccccEEcHHHHHHHHHHHHHcccHHHcccccEEEEEEcccccHHHHHHHHHHHHHHTHTTcEEEEEETTTccHHHHHHHHHTccEEEEEccccTTcccHHHHHHHHHHHHTcccccEEEEEEEEccccHHHHHHHHHHHHTTcccccccEEEEccccHHHHHHHHHHHHHHHHGGcccTTcEccccTcccTTTHHccccccccTTTTTcccccccccccEEEETTcccccccccccTTcHHHHHHTHEEEEEcccHHHHHHHHHHHHHTccccEEEEEcccccccccGGGGTTHHHHccGGGccccHHHGGGcTTcEEEETccEEEEETTTTEEEETTccEEEccEEEEcccEEEcccGGcccTTTccGTTccccEEEcccHHHHHHHHHHcHTcccccTTcEEEEEcccHHHHHHHHHHHHTTcEEEEEEccccTTTTTccHHHHHHHHHHHHTTTcEEEEcccEEEEETTEEEETTTTcccccEEEccEEEEcccEEEccHHHHHTTccccccEEccTTcccccTTEEEcGGGEEEEcTTTccHHHHHHHHHHHHHHHHcTTccccccccEEEEEETTEEEEEEEcccccEcccEEEEEEccccccEEEEEEETTEEEEEEEEccHHHHHHHHHHTTccccHHHHHHH### DISOP:02AL 403-423, 459-461, 463-468| PSIPRED ccccEEcccEEEEEEEccccEEEEEEEEccccccEEEEEEEEcccEEEEEcccccHHHHHHHHHHHHccccccccEEEEccccccHHHHHHHHHHHccccEEEEEHHHHHHHHHHccccccEEEEccccEEEEcccEEEEEEcccccccccEEEEEccccEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccEEEEccHHHHHHHHHHHHcccccccccccEEEEEEEEccHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHccEEEEEcccccccccHHHHHHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHHcccEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccEEccEEEEEEccccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHccccEEEEEEcccccccccccccHHHcccccHHHHHcccHHHHHHcccEEEEccEEEEEEccccEEEEccccEEEEEEEEEEcccEEEEccccccccccccccccccccccccEEEEccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHcccEEEEEcccccccHHcccHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEEccccEEEEEEEEEEEccEEcHHHHHHccEEEccEEEEccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEcccEEEEEEEccccccccEEEEEccccccEEEEEEEEccEEEEEEEEcccHHHHHHHHHHHHcccHHHHHHHHcc //