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Clostridium perfringens str. 13 (cper0)
Gene : CPE1040
DDBJ      :CPE1040      probable Thr-phospho decarboxylase
Swiss-Prot:             

Homologs  Archaea  64/68 : Bacteria  762/915 : Eukaryota  129/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:354 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->338 1lc7A PDBj 7e-66 39.4 %
:RPS:PDB   9->299 2douB PDBj 4e-29 17.2 %
:RPS:SCOP  18->339 1fg3A  c.67.1.1 * 4e-49 24.5 %
:HMM:SCOP  1->353 1lc5A_ c.67.1.1 * 1.5e-73 27.4 %
:RPS:PFM   60->282 PF00155 * Aminotran_1_2 3e-14 28.8 %
:HMM:PFM   22->349 PF00155 * Aminotran_1_2 4.3e-46 24.6 325/363  
:BLT:SWISS 2->338 COBD_SALTI 2e-66 39.4 %
:PROS 210->223|PS00105|AA_TRANSFER_CLASS_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80746.1 GT:GENE CPE1040 GT:PRODUCT probable Thr-phospho decarboxylase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 1240580..1241644 GB:FROM 1240580 GB:TO 1241644 GB:DIRECTION + GB:GENE CPE1040 GB:PRODUCT probable Thr-phospho decarboxylase GB:NOTE 354 aa, similar to prf:2408370A Thr(phospho) decarboxylase from Salmonella typhimurium (364 aa); 37.6% identity in 258 aa overlap GB:PROTEIN_ID BAB80746.1 LENGTH 354 SQ:AASEQ MNLGHGGNVEEIKRIYGLKENEIIDFSANINPLGISERVKEAMVRGINSIERYPDITYYELKKGISNFEKVALENIVIGNGAAEVIFNIVRGIKPKKALIVAPTFSEYEDALNSVECEVNHYILKDNYSVDNGFLEEIKEELDIIFLCNPNNPTGALIEKDFSLKVLEKAKKMNITVVFDESFLDFVEDNDRYSLIKELNNFQNLIIVKSLTKLFAFPGIRLGYGLSSNNNFIEKINSVVTPWSVNTVADYAGREALKDVEYIKNSVAYIKKENEFLYNGLENFKDITTFKGAVNFVFFKLNKNINLREELIRRGIIIRSCSNYIGLDNSFYRVAVRTREENKKLLEELSKVLK GT:EXON 1|1-354:0| BL:SWS:NREP 1 BL:SWS:REP 2->338|COBD_SALTI|2e-66|39.4|335/364| PROS 210->223|PS00105|AA_TRANSFER_CLASS_1|PDOC00098| SEG 307->319|lreelirrgiiir| SEG 340->353|eenkklleelskvl| BL:PDB:NREP 1 BL:PDB:REP 2->338|1lc7A|7e-66|39.4|335/358| RP:PDB:NREP 1 RP:PDB:REP 9->299|2douB|4e-29|17.2|290/368| RP:PFM:NREP 1 RP:PFM:REP 60->282|PF00155|3e-14|28.8|222/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 22->349|PF00155|4.3e-46|24.6|325/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 1 RP:SCP:REP 18->339|1fg3A|4e-49|24.5|310/355|c.67.1.1| HM:SCP:REP 1->353|1lc5A_|1.5e-73|27.4|350/0|c.67.1.1|1/1|PLP-dependent transferases| OP:NHOMO 2049 OP:NHOMOORG 955 OP:PATTERN 1112-13444344443-41-121421142233411222222323232324424124364652123-24 114-344322212144433-31114233333323331342211122-12221233212----3212343321222222-12423221144242522---213123313-11111111111----122222222232333122232122223322222111211122322234123344133441----222221222222342232223222212223332221122222223222222212222222211131-1-22-1---112222-1-22-333---1--122211111111111-------------221212222245375777676757636445555344122443322432223325544-242412331-----112221111111111111111113---------151-2223525322141-23111111111221111111111121111-------1--11-1----1---------1111214311133333331122233432223334343333134431121-111-1-4422543241211111333-1414422132135112-222422223--1-24133111131111122--11-2111322112224522232213222223222212322331--222211111132123222222222222-2222222222222222222343234433224233333343443122222221-22221222211111-2-----333324222222232-3222111222222212334222222233422223222211112111212232222222322--2-2-1--1----2122113323--------1----------1--------2-------2-34222222124 ----2-1-----1221222111143421211-12211333322111112322321111-11111111211111111111111111111--1122-11121111232-12111--11------11-------------1------------------------111-----2---12111F111111242241213364- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 338 STR:RPRED 95.5 SQ:SECSTR ccccHHHHHHHHHHHHHHTTcccEEcccccccccccHHHHHHHHHHHTcGcccccHHHHHHHHHHHHHHHHHHTcEEEEccHHHHHHHHHHHTccTTcEEEccccHHHHHHHHHTTcEEEEEcccTTccccGGGccHHHHHEEEEEEccccTTTcccccHHHHHHHHHHHHHHTcEEEEEcTTTTcccccccccGGGcTTGGGTEEEEEEHHHHHTcGGGccEEEEEEcHHHHHHHHHHHHTTcccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHTTTTTcEEcccccccEEEEEEcTTccHHHHHHHHTTEEcEEcTTcTTccTTEEEEEccc################ DISOP:02AL 1-3| PSIPRED ccccccccHHHHHHHHccccccEEEcccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHEEEEccHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHccEEEEEEccccccccHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEccHHHHcccccccccHHHccccccEEEEEccHHHHccHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccEEEEEcccHHHHHHHHHHcccEEEEccccccccccEEEEEEccHHHHHHHHHHHHHHHc //