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Clostridium perfringens str. 13 (cper0)
Gene : CPE1097
DDBJ      :CPE1097      probable transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:70 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->70 1b0nA PDBj 5e-09 17.1 %
:RPS:SCOP  12->69 2ofyA1  a.35.1.3 * 3e-10 15.5 %
:HMM:SCOP  2->69 2b5aA1 a.35.1.3 * 1.9e-09 22.4 %
:HMM:PFM   12->61 PF01381 * HTH_3 2.5e-11 22.4 49/55  
:BLT:SWISS 5->69 YOZG_BACSU 5e-08 35.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80803.1 GT:GENE CPE1097 GT:PRODUCT probable transcriptional regulator GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1300313..1300525) GB:FROM 1300313 GB:TO 1300525 GB:DIRECTION - GB:GENE CPE1097 GB:PRODUCT probable transcriptional regulator GB:NOTE 70 aa, similar to pir:G82969 probable transcription regulator PA5403 from Pseudomonas aeruginosa (strain PAO1) (68 aa); 41.2% identity in 68 aa overlap GB:PROTEIN_ID BAB80803.1 LENGTH 70 SQ:AASEQ MIKTNLHIELAKARMTRKELSKVTGIRESTISGYANNKYVYIAKDHIDKICRVLNCTPNDLFEYIPDDEE GT:EXON 1|1-70:0| BL:SWS:NREP 1 BL:SWS:REP 5->69|YOZG_BACSU|5e-08|35.4|65/84| RP:PDB:NREP 1 RP:PDB:REP 1->70|1b0nA|5e-09|17.1|70/103| HM:PFM:NREP 1 HM:PFM:REP 12->61|PF01381|2.5e-11|22.4|49/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 12->69|2ofyA1|3e-10|15.5|58/82|a.35.1.3| HM:SCP:REP 2->69|2b5aA1|1.9e-09|22.4|67/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 9 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------111-1----------1------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 70 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHTTccccccHHHHHHHHHHHTccHHHHHccTTcccc DISOP:02AL 68-70| PSIPRED cEEEEHHHHHHHccccHHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHHHHcccHHHEEEEcccccc //