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Clostridium perfringens str. 13 (cper0)
Gene : CPE1235
DDBJ      :CPE1235      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:317 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   88->315 2zxqA PDBj 2e-05 26.1 %
:RPS:PDB   32->259 3ecqB PDBj 2e-27 16.7 %
:HMM:PFM   32->75 PF03686 * UPF0146 0.00019 38.6 44/127  
:BLT:SWISS 7->147 LPXK_PELUB 9e-07 35.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80941.1 GT:GENE CPE1235 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1442598..1443551) GB:FROM 1442598 GB:TO 1443551 GB:DIRECTION - GB:GENE CPE1235 GB:PRODUCT hypothetical protein GB:NOTE 317 aa, partially similar to pir:T29435 hypothetical protein SC3A7.16c from Streptomyces coelicolor (1361 aa); 23.5% identity in 226 aa overlap GB:PROTEIN_ID BAB80941.1 LENGTH 317 SQ:AASEQ MAQYKFMRKNLSKYKSYLLTSIYGLTSESSKGVKDYISKESTKKNIDGEVIDLKEKLKRGLEFNNKDITNPKFILEGNIEFRKILSIEILKSNGLEIVVDREFPNIVQYKIGEKILKGARKSRDEFLINGSRFKPKVTSEKIYDHIEGEYYLYRLNFRNINVEMAISFKIIDNTVKLQFEEINEKGEFKIYKIQIPNHNLISINEEEENLDITTARAHGILSSNDYFYDLREKEVDQNPVHQTMAFLDNGGLVASLENNVLDYEKQVYYQTTLNEGVKEAGLWNGSWTYREQLSDSEGGTFSGVTELPWSRIVISYL GT:EXON 1|1-317:0| BL:SWS:NREP 1 BL:SWS:REP 7->147|LPXK_PELUB|9e-07|35.5|121/314| SEG 197->210|nhnlisineeeenl| BL:PDB:NREP 1 BL:PDB:REP 88->315|2zxqA|2e-05|26.1|222/1178| RP:PDB:NREP 1 RP:PDB:REP 32->259|3ecqB|2e-27|16.7|221/1323| HM:PFM:NREP 1 HM:PFM:REP 32->75|PF03686|0.00019|38.6|44/127|UPF0146| OP:NHOMO 4 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------211----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 89.6 SQ:SECSTR ##############################HcEEEEEETTEEccccEEccHHHHHHHTccEEETcccEEEEEccccccccccccccEEEEEcccEEEEEEcccccEEEEEETTEEEEccccccccEEETTEEEccEEEEEEcccHHcEEEEEEEEEEETTEEEEEEEHEEEEcccccTTcccccGGGHcccEEEcTTcccEEEETTcTTcEEEEEccccTTcccEEEEEccc#TcccccEEEEEEEEEccccEEEEEEcccTTcccEEEEEEEETTEEEEEEEEccEEccEEEEcTTccEEEccccccEEEEEEE## DISOP:02AL 1-7| PSIPRED cccHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccEEEccEEEEEHHHccccEEEcccccccccEEEEcccccccEEEEEEEEcccEEEEEEcccccEEEEEEcHHHcccccccEEEEEEccccccccEEEEEEccccccEEEEEEEEEccccEEEEEEEEEEEEEEEEEEEEccccccccEEEEEccccEEEEEEcccccccccEEEEccEEccccEEccccccccccccccEEEEEEcccEEEEEEEEcEEEccEEEEEEEEEEccEEEEEEEcccEEEEEEEEcccccEEEEEccccHHEEEEEcc //