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Clostridium perfringens str. 13 (cper0)
Gene : CPE1265
DDBJ      :CPE1265      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.47.1d.169.1
:587 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   178->358 3egiB PDBj 6e-05 13.3 %
:RPS:SCOP  199->310 1xiyA1  c.47.1.10 * 7e-04 13.9 %
:RPS:SCOP  446->482 1wk1A  d.169.1.1 * 3e-04 29.7 %
:HMM:PFM   541->581 PF10752 * DUF2533 0.00039 26.8 41/84  
:HMM:PFM   103->146 PF06030 * DUF916 0.001 15.9 44/122  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80971.1 GT:GENE CPE1265 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 1480226..1481989 GB:FROM 1480226 GB:TO 1481989 GB:DIRECTION + GB:GENE CPE1265 GB:PRODUCT hypothetical protein GB:NOTE 587 aa, no significant homology. GB:PROTEIN_ID BAB80971.1 LENGTH 587 SQ:AASEQ MKKDTILGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNVTLSSSDFINENGDLISSNNIKISWLKETLANIGRSNPSAPLEPFPDIIHNSGSLNIEKNKIASAWINIKIPRNAKPGIYNGSIEVTADELEKAYTFDYSFEVLNLVQPLPRETNTQIEFWQHPYTIARYYKISKEDLFTEKHFKYLKDNLKEYRNIGGRGVIATIVHEAWNHQSYDSDPSMIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCYSIVPWNNRIQYFNEATNKEEAINPNPGGDLWINIWTQFLTSFMSHLEEKGWFNITYISMDERSMDDLKACVDLIESITNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHINHNSNDMKNMATHRQELGLLTTIYTCTGDYPSSFTISDPIEGAFTMWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPGDPFLIYPAEKDSIGKTFYSTPRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRPNKGENAYGSAVAASKEDRDLTISEANRIKNGINNFAREFISLTMETL GT:EXON 1|1-587:0| RP:PDB:NREP 1 RP:PDB:REP 178->358|3egiB|6e-05|13.3|173/189| HM:PFM:NREP 2 HM:PFM:REP 541->581|PF10752|0.00039|26.8|41/84|DUF2533| HM:PFM:REP 103->146|PF06030|0.001|15.9|44/122|DUF916| RP:SCP:NREP 2 RP:SCP:REP 199->310|1xiyA1|7e-04|13.9|101/171|c.47.1.10| RP:SCP:REP 446->482|1wk1A|3e-04|29.7|37/150|d.169.1.1| OP:NHOMO 15 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------1111-2-----------1---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---111---11-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 42.6 SQ:SECSTR #################################################################################################################################################################################EEEEE###EEcccEEcTTccEEccTHHHHHHHHHHHHHcTTTcHHHHHHHHTTEEEEEEccHHHHHHHHHHHHTTcGGGEEE#####EEccHHHHGGGccccEEEEcccccccccHHHcccHHHHHHHHHTTcccEEEEEETTccHHHHHHTTcTTccEEEEEEEETTEEEEEEEEcGGGccEEEEccEEEEEEccccTTcccEEEEEEcccccTccEEEccccccccTTcccTTcccEEcEEcccTTccccccEccE######################################################################################################################################################## DISOP:02AL 1-4| PSIPRED ccccEEEEEEccccHHHHHHHHcccccccccccHHHHHccccEEEEEEEEEEcccccccEEEEEEEcccccccccccccEEEEEEEEEHHHHcccccccccccccccHHccccccccccEEEEEEEEEEccccccccEEEEEEEEEEccccccEEEcEEEEEccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccEEEEEEccccccccEEcccccEEEEEEEccccEEEEHHHHHHHHHHHHHcccccccccHHEEEEEEEccccccEEEEcccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHcccccccEEEEEEEcccccccHHHHHHcccEEEcccccccccccHHHHHHHHHHccccEEEEEEEccccccEEEccHHHHHHHHHHHHHHcccEEEEEEEcccccccccccEEEEccccccEEEccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccEEcccccccEEHHHHHHHHHHHHHHHHHHHHHHHHcc //