Clostridium perfringens str. 13 (cper0)
Gene : CPE1443
DDBJ :CPE1443 hypothetical protein
Swiss-Prot:
Homologs Archaea 2/68 : Bacteria 31/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
:206 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM 72->182 PF07155 * DUF1393 1.4e-05 19.4 108/169
:BLT:SWISS 14->192 Y562A_THEMA 6e-06 24.1 %
:TM
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81149.1
GT:GENE CPE1443
GT:PRODUCT hypothetical protein
GT:DATABASE GIB00075CH01
GT:ORG cper0
GB:ACCESSION GIB00075CH01
GB:LOCATION complement(1701126..1701746)
GB:FROM 1701126
GB:TO 1701746
GB:DIRECTION -
GB:GENE CPE1443
GB:PRODUCT hypothetical protein
GB:NOTE 206 aa, similar to no homology from (410 aa); 28.3% identity in 127 aa overlap. Putative N-terminal signal sequence and 4 putative transmembrane regions were found by PSORT.
GB:PROTEIN_ID BAB81149.1
LENGTH 206
SQ:AASEQ MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLSPFLNFIIVGFIFISMFLAKVNNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNVNSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLFDTMKDIITGSIFPIILAPSLNKFLKGKKNRLFQDLTDFMRENNKRK
GT:EXON 1|1-206:0|
BL:SWS:NREP 1
BL:SWS:REP 14->192|Y562A_THEMA|6e-06|24.1|170/192|
TM:NTM 6
TM:REGION 7->29|
TM:REGION 33->55|
TM:REGION 59->81|
TM:REGION 93->114|
TM:REGION 122->144|
TM:REGION 163->185|
HM:PFM:NREP 1
HM:PFM:REP 72->182|PF07155|1.4e-05|19.4|108/169|DUF1393|
OP:NHOMO 42
OP:NHOMOORG 33
OP:PATTERN ----------------------------------------------2--1------------------ ---------------------------------------------------------------------------111--------------------------------------------------------------------------------------------------------------------------------------------------1222222----------------------1--------------1111-------------------------------------------------------1---1-1111111---111----------22-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
DISOP:02AL 1-3, 202-206|
PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccc
//
[GTOP]
