[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Clostridium perfringens str. 13 (cper0)
Gene : CPE1602
DDBJ      :CPE1602      probable molybdopterin biosynthesis protein
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  573/915 : Eukaryota  114/199 : Viruses  0/175   --->[See Alignment]
c.111.1
:269 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   77->182 3h9qD PDBj 4e-16 35.8 %
:RPS:PDB   59->258 3cmmA PDBj 4e-28 20.3 %
:RPS:SCOP  61->258 1jw9B  c.111.1.1 * 8e-29 27.6 %
:HMM:SCOP  78->266 1yovB1 c.111.1.2 * 5.8e-44 35.1 %
:RPS:PFM   85->210 PF00899 * ThiF 7e-19 43.9 %
:HMM:PFM   83->212 PF00899 * ThiF 3.6e-34 42.5 127/136  
:BLT:SWISS 80->207 UBA4_CANAL 1e-17 35.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81308.1 GT:GENE CPE1602 GT:PRODUCT probable molybdopterin biosynthesis protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1875061..1875870) GB:FROM 1875061 GB:TO 1875870 GB:DIRECTION - GB:GENE CPE1602 GB:PRODUCT probable molybdopterin biosynthesis protein GB:NOTE 269 aa, similar to pir:C81307 probable molybdopterin biosynthesis protein Cj1046c from Campylobacter jejuni (strain NCTC 11168) (267 aa); 45.8% identity in 264 aa overlap. 2 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB81308.1 LENGTH 269 SQ:AASEQ MNIKINEKWREVKENCTVYALKNEEFPDSHVIVLNGFPLVEDKKLKDGDRIVFIKKGIMPNKEELEELMVSRHTPGIHEKLKRIKVLIAGCGGLGSNIAISLGRIGVGSISLVDFDIVEPSNLNRQQYYIEDIGEFKVTALKRNLIRINPFIKIEALNLKLSEDNMGILQGADIIIEAFDNPDYKALLANYVLGNMKDKFLISSSGMAGFYDSNLIKTKQITDKFYICGDLVNEAKEGCGLMAPRVAICANHMANLVIDIAINKIEFQK GT:EXON 1|1-269:0| BL:SWS:NREP 1 BL:SWS:REP 80->207|UBA4_CANAL|1e-17|35.7|126/438| BL:PDB:NREP 1 BL:PDB:REP 77->182|3h9qD|4e-16|35.8|106/333| RP:PDB:NREP 1 RP:PDB:REP 59->258|3cmmA|4e-28|20.3|197/1001| RP:PFM:NREP 1 RP:PFM:REP 85->210|PF00899|7e-19|43.9|123/135|ThiF| HM:PFM:NREP 1 HM:PFM:REP 83->212|PF00899|3.6e-34|42.5|127/136|ThiF| GO:PFM:NREP 1 GO:PFM GO:0003824|"GO:catalytic activity"|PF00899|IPR000594| RP:SCP:NREP 1 RP:SCP:REP 61->258|1jw9B|8e-29|27.6|192/240|c.111.1.1| HM:SCP:REP 78->266|1yovB1|5.8e-44|35.1|188/0|c.111.1.2|1/1|Activating enzymes of the ubiquitin-like proteins| OP:NHOMO 1036 OP:NHOMOORG 725 OP:PATTERN --1---111111111-1-------1---1--111------11-2321111111-1111-2111-1--1 11--1211---1-111222-211131222221111111111-------111-112-----1111-1-1-1-1---1111-2-11111121111-11---11111-1-111---------------111---1111111111---1131121111111---111--1111211-11111-1111-----11---23333323353323331122123322-11-21------3231111111111111132212-------1--111--------1--------2--------------------------------1-1----3222111111111111122111111112-----21233--1311-1312112----11-21-11---11--1--1----------1-11-11-2--1--111-11111121---------1--21-111111111-------11--111111-------------------1-1----111--------1111----11111----1-111-1112-1---1121-111-121-111111111-12111-2-11311-11111232221423--2-1-2-11-11111111112212121-1112--11121112111311112-211112211122--11121------2-24--13112322222-1232222232123223222121113432222222221121221122222231-211121111131---3111111--11-2-122222211111322222222222112132121-1111111111-2-1--11--232223333312211--11111112111111--11------------1-----------------------------11--1---1-1 1-2211--5211222-222222222231111112121112111211111211111-2--111-11111-1-112111111111211-1---12-1-2-2-21--2-1-12--1---------------------------------------------1---22211--1-21111-1-6-----2-1122243-1-11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 238 STR:RPRED 88.5 SQ:SECSTR #############################HHHTccccccHHHHHHHHcHHHHccccccTTTcccccTTHHHHHHHcHHHHHHTcEEEEEcccHHHHHHHHTTTccTTcEEEEEccccccGGGTTTcTTccGGTTccHHHHHHHHHHHHcGGGTTTEEEEcccccGGHHHHHccEEEEccccHHHHHHHHHHHHHHHHTccEEEEEEEETTEEEEEEEcTTTcccGGGccccccccccHHTccccHHHHHHHHHHHHHHHHHHTcccE## DISOP:02AL 268-269| PSIPRED cEEEHHHHHHHHHHHccHHHHccccccccccEEEEcHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHccccEEEEEEccEEcHHHHccHHccHHHcccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHccccEEEEccccHHHHHHHHHHHHHHccccEEEEccHHHHccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHccc //