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Clostridium perfringens str. 13 (cper0)
Gene : CPE1684
DDBJ      :CPE1684      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  357/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.107.1
:317 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->296 3devA PDBj 5e-31 33.3 %
:RPS:PDB   19->314 3devA PDBj 4e-37 28.2 %
:RPS:SCOP  21->314 1ir6A  c.107.1.2 * 1e-22 15.6 %
:HMM:SCOP  13->309 1k23A_ c.107.1.1 * 6.5e-64 30.2 %
:HMM:PFM   10->154 PF01368 * DHH 3.3e-18 20.0 110/117  
:HMM:PFM   255->308 PF02272 * DHHA1 5.7e-13 42.6 54/68  
:BLT:SWISS 21->315 NRNA_BACSU 4e-33 33.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81390.1 GT:GENE CPE1684 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1960598..1961551) GB:FROM 1960598 GB:TO 1961551 GB:DIRECTION - GB:GENE CPE1684 GB:PRODUCT conserved hypothetical protein GB:NOTE 317 aa, similar to pir:F70440 conserved hypothetical protein aq_1630 from Aquifex aeolicus (325 aa); 39.2% identity in 296 aa overlap GB:PROTEIN_ID BAB81390.1 LENGTH 317 SQ:AASEQ MRFHDVISIINKSKKIGITYHVSPDGDALGSVLALLQGIRIYGKEAYVISKDLVSDNLSFLPYAEEITGEVIKPSEDTDCVIVLDCGNVERISADLNEFKGTLVNMDHHLSNDKYGIINYVDTEASATAEIIFMLLKELKVEINENIAKCLYTSLITDTGSFRYSNSTERTHIIAGELVNYIKHDEIHRNIFDNKPFAKMKLMSLVLGDMELVCNNKIVLMRITKEMIDSIGEEVQNSSDVVSLGNQIKGVEGCILLKEVDEGVKVSLRSKDTLDVRKIAENFGGGGHTKASGAFIKGVSIDEAKNKILEILAKEMV GT:EXON 1|1-317:0| BL:SWS:NREP 1 BL:SWS:REP 21->315|NRNA_BACSU|4e-33|33.6|286/313| SEG 7->18|isiinkskkigi| BL:PDB:NREP 1 BL:PDB:REP 21->296|3devA|5e-31|33.3|264/310| RP:PDB:NREP 1 RP:PDB:REP 19->314|3devA|4e-37|28.2|287/310| HM:PFM:NREP 2 HM:PFM:REP 10->154|PF01368|3.3e-18|20.0|110/117|DHH| HM:PFM:REP 255->308|PF02272|5.7e-13|42.6|54/68|DHHA1| RP:SCP:NREP 1 RP:SCP:REP 21->314|1ir6A|1e-22|15.6|288/385|c.107.1.2| HM:SCP:REP 13->309|1k23A_|6.5e-64|30.2|295/307|c.107.1.1|1/1|DHH phosphoesterases| OP:NHOMO 475 OP:NHOMOORG 362 OP:PATTERN ------------------------------------11-------------------11-1------- 11---111111-1-11111-11--1111111111111111-111----------------11--1-1-----------1111111111111111111--11111112111---------------1111111111111111---11-------------------------------------1111112111122222222222222211221122212111111111111111111111111111122222211122111222222221121211112221111222222221222221111111111111211111111121122222222222212222222222221122111111111111122-11111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111111111------111-------------------11111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------1111111111232322-22132222221112131111111221212111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 296 STR:RPRED 93.4 SQ:SECSTR ##################EccccccHHHHHHHHHHHHHHHHHcTTcEEEEcccccGGGTTTccccccETHHcccTTTTcEEEEEccccGGGcccGGGGccccEEEEEccccccccccEEEEcTTcccHHHHHHHHHHTTTTTccHHHHHHHHHHHHHHTTTTTcTTccHHHHHHHHHHHTTHccccHHHHHHHHcccGGGHHHHHHHHcccccTTccEEEEEEcHHHHHHTTccHHHHTTcGGGcTTcTTccEEEEEEcEcccEEEEEEEccccccHHHHHHTTcEEETTEEEEEEccHHHHHHHHHHHHHTTc### DISOP:02AL 316-318| PSIPRED ccHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccHHHHccccccccEEEEEccccHHHccHHHHHHcccEEEEcccccccccccEEEEccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHEEEccccEEEEEEcHHHHHHccccHHHHHHHHHHHcccccEEEEEEEEEEccEEEEEEEEcccccHHHHHHHHcccccccccEEEEccccHHHHHHHHHHHHHHHcc //